Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CHMP2BQ9UQN3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.68■□□□□ 0.9
CHMP2BQ9UQN3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP2BQ9UQN3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP2BQ9UQN3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.68■□□□□ 0.9
CHMP2BQ9UQN3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.68■□□□□ 0.9
CHMP2BQ9UQN3 AP001160.3-201ENST00000601484 763 ntBASIC20.68■□□□□ 0.9
CHMP2BQ9UQN3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.68■□□□□ 0.9
CHMP2BQ9UQN3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.68■□□□□ 0.9
CHMP2BQ9UQN3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.68■□□□□ 0.9
CHMP2BQ9UQN3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP2BQ9UQN3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP2BQ9UQN3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP2BQ9UQN3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
CHMP2BQ9UQN3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2BQ9UQN3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHMP2BQ9UQN3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2BQ9UQN3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2BQ9UQN3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2BQ9UQN3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2BQ9UQN3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2BQ9UQN3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.65■□□□□ 0.9
CHMP2BQ9UQN3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2BQ9UQN3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2BQ9UQN3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.65■□□□□ 0.9
CHMP2BQ9UQN3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHMP2BQ9UQN3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.65■□□□□ 0.9
CHMP2BQ9UQN3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2BQ9UQN3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2BQ9UQN3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2BQ9UQN3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2BQ9UQN3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHMP2BQ9UQN3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHMP2BQ9UQN3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
CHMP2BQ9UQN3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHMP2BQ9UQN3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.64■□□□□ 0.9
CHMP2BQ9UQN3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP2BQ9UQN3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.64■□□□□ 0.89
CHMP2BQ9UQN3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.64■□□□□ 0.89
CHMP2BQ9UQN3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CHMP2BQ9UQN3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP2BQ9UQN3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP2BQ9UQN3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.64■□□□□ 0.89
CHMP2BQ9UQN3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.64■□□□□ 0.89
CHMP2BQ9UQN3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.64■□□□□ 0.89
CHMP2BQ9UQN3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CHMP2BQ9UQN3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.64■□□□□ 0.89
CHMP2BQ9UQN3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.64■□□□□ 0.89
CHMP2BQ9UQN3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CHMP2BQ9UQN3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP2BQ9UQN3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.64■□□□□ 0.89
CHMP2BQ9UQN3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP2BQ9UQN3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP2BQ9UQN3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CHMP2BQ9UQN3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms