Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA1Q9UND3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA1Q9UND3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA1Q9UND3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA1Q9UND3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA1Q9UND3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.76■□□□□ 0.59
NPIPA1Q9UND3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA1Q9UND3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA1Q9UND3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.76■□□□□ 0.59
NPIPA1Q9UND3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.76■□□□□ 0.59
NPIPA1Q9UND3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.76■□□□□ 0.59
NPIPA1Q9UND3 AC006058.3-201ENST00000606217 1069 ntBASIC18.76■□□□□ 0.59
NPIPA1Q9UND3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA1Q9UND3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.76■□□□□ 0.59
NPIPA1Q9UND3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.76■□□□□ 0.59
NPIPA1Q9UND3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA1Q9UND3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA1Q9UND3 AL049796.1-201ENST00000565336 1766 ntBASIC18.76■□□□□ 0.59
NPIPA1Q9UND3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.75■□□□□ 0.59
NPIPA1Q9UND3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NPIPA1Q9UND3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPA1Q9UND3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPA1Q9UND3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPA1Q9UND3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NPIPA1Q9UND3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
NPIPA1Q9UND3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.75■□□□□ 0.59
NPIPA1Q9UND3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.75■□□□□ 0.59
NPIPA1Q9UND3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.75■□□□□ 0.59
NPIPA1Q9UND3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.75■□□□□ 0.59
NPIPA1Q9UND3 AC100791.3-201ENST00000617619 330 ntBASIC18.75■□□□□ 0.59
NPIPA1Q9UND3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.75■□□□□ 0.59
NPIPA1Q9UND3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.75■□□□□ 0.59
NPIPA1Q9UND3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPA1Q9UND3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPA1Q9UND3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPA1Q9UND3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.75■□□□□ 0.59
NPIPA1Q9UND3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 MCRIP2P1-201ENST00000394346 511 ntBASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 AL589743.5-201ENST00000616611 1050 ntBASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPA1Q9UND3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.73■□□□□ 0.59
NPIPA1Q9UND3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPA1Q9UND3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPA1Q9UND3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.73■□□□□ 0.59
NPIPA1Q9UND3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPA1Q9UND3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPA1Q9UND3 AC007322.3-201ENST00000426526 701 ntBASIC18.73■□□□□ 0.59
NPIPA1Q9UND3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NPIPA1Q9UND3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.73■□□□□ 0.59
NPIPA1Q9UND3 RPS2P52-201ENST00000469610 820 ntBASIC18.73■□□□□ 0.59
NPIPA1Q9UND3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.73■□□□□ 0.59
NPIPA1Q9UND3 UNC93B5-201ENST00000530315 699 ntBASIC18.73■□□□□ 0.59
NPIPA1Q9UND3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.73■□□□□ 0.59
NPIPA1Q9UND3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.73■□□□□ 0.59
NPIPA1Q9UND3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
NPIPA1Q9UND3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
NPIPA1Q9UND3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPA1Q9UND3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPA1Q9UND3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NPIPA1Q9UND3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPA1Q9UND3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPA1Q9UND3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPA1Q9UND3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
NPIPA1Q9UND3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPA1Q9UND3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NPIPA1Q9UND3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPA1Q9UND3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
NPIPA1Q9UND3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.72■□□□□ 0.59
NPIPA1Q9UND3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPA1Q9UND3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPA1Q9UND3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.72■□□□□ 0.59
NPIPA1Q9UND3 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.72■□□□□ 0.59
NPIPA1Q9UND3 AC128676.1-201ENST00000454392 318 ntBASIC18.72■□□□□ 0.59
NPIPA1Q9UND3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPA1Q9UND3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPA1Q9UND3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
NPIPA1Q9UND3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms