Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH3Q9UM47 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH3Q9UM47 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH3Q9UM47 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH3Q9UM47 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
NOTCH3Q9UM47 CDV3P1-201ENST00000471403 739 ntBASIC15.67■□□□□ 0.1
NOTCH3Q9UM47 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NOTCH3Q9UM47 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.67■□□□□ 0.1
NOTCH3Q9UM47 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH3Q9UM47 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH3Q9UM47 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 AL135905.2-201ENST00000584934 1404 ntBASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 FAM197Y4-202ENST00000622692 608 ntBASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH3Q9UM47 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 AC091799.1-201ENST00000422823 811 ntBASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 AC007322.3-201ENST00000426526 701 ntBASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH3Q9UM47 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
NOTCH3Q9UM47 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
NOTCH3Q9UM47 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 AC133681.1-201ENST00000465482 601 ntBASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 AC120498.8-201ENST00000614275 531 ntBASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms