Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PDLIM7Q9NR12 RCN1P1-201ENST00000400413 996 ntBASIC22.94■■□□□ 1.26
PDLIM7Q9NR12 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC22.94■■□□□ 1.26
PDLIM7Q9NR12 TSPY15P-201ENST00000457163 923 ntBASIC22.94■■□□□ 1.26
PDLIM7Q9NR12 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDLIM7Q9NR12 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PDLIM7Q9NR12 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PDLIM7Q9NR12 TK2-213ENST00000563369 882 ntTSL 5 BASIC22.94■■□□□ 1.26
PDLIM7Q9NR12 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDLIM7Q9NR12 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDLIM7Q9NR12 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PDLIM7Q9NR12 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDLIM7Q9NR12 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.93■■□□□ 1.26
PDLIM7Q9NR12 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
PDLIM7Q9NR12 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
PDLIM7Q9NR12 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.93■■□□□ 1.26
PDLIM7Q9NR12 FEM1AP4-201ENST00000443167 1987 ntBASIC22.93■■□□□ 1.26
PDLIM7Q9NR12 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDLIM7Q9NR12 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.93■■□□□ 1.26
PDLIM7Q9NR12 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDLIM7Q9NR12 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDLIM7Q9NR12 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PDLIM7Q9NR12 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDLIM7Q9NR12 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDLIM7Q9NR12 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PDLIM7Q9NR12 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.92■■□□□ 1.26
PDLIM7Q9NR12 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.92■■□□□ 1.26
PDLIM7Q9NR12 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDLIM7Q9NR12 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PDLIM7Q9NR12 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.92■■□□□ 1.26
PDLIM7Q9NR12 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.92■■□□□ 1.26
PDLIM7Q9NR12 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.92■■□□□ 1.26
PDLIM7Q9NR12 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
PDLIM7Q9NR12 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PDLIM7Q9NR12 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.92■■□□□ 1.26
PDLIM7Q9NR12 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.92■■□□□ 1.26
PDLIM7Q9NR12 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
PDLIM7Q9NR12 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDLIM7Q9NR12 AC116050.2-201ENST00000612102 1779 ntBASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 AC007322.3-201ENST00000426526 701 ntBASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 MTDHP1-201ENST00000605323 784 ntBASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 AC012306.2-201ENST00000609350 630 ntBASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 AC097493.4-201ENST00000641197 219 ntBASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 AC026310.3-201ENST00000625186 2373 ntBASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDLIM7Q9NR12 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 AC124016.1-201ENST00000609552 612 ntBASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 AL049796.1-201ENST00000565336 1766 ntBASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDLIM7Q9NR12 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
PDLIM7Q9NR12 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
PDLIM7Q9NR12 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
PDLIM7Q9NR12 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.89■■□□□ 1.26
PDLIM7Q9NR12 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDLIM7Q9NR12 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC22.89■■□□□ 1.25
PDLIM7Q9NR12 AC133681.1-201ENST00000465482 601 ntBASIC22.89■■□□□ 1.25
PDLIM7Q9NR12 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PDLIM7Q9NR12 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.89■■□□□ 1.25
PDLIM7Q9NR12 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.25
PDLIM7Q9NR12 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.89■■□□□ 1.25
PDLIM7Q9NR12 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.89■■□□□ 1.25
PDLIM7Q9NR12 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PDLIM7Q9NR12 MIR4785-201ENST00000585005 73 ntBASIC22.89■■□□□ 1.25
PDLIM7Q9NR12 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms