Protein–RNA interactions for Protein: Q9NQ75

CASS4, Cas scaffolding protein family member 4, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASS4Q9NQ75 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASS4Q9NQ75 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASS4Q9NQ75 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CASS4Q9NQ75 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CASS4Q9NQ75 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASS4Q9NQ75 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.65■□□□□ 0.9
CASS4Q9NQ75 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASS4Q9NQ75 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CASS4Q9NQ75 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.65■□□□□ 0.9
CASS4Q9NQ75 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.65■□□□□ 0.9
CASS4Q9NQ75 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.65■□□□□ 0.9
CASS4Q9NQ75 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.65■□□□□ 0.9
CASS4Q9NQ75 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASS4Q9NQ75 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
CASS4Q9NQ75 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.65■□□□□ 0.9
CASS4Q9NQ75 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.65■□□□□ 0.9
CASS4Q9NQ75 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.65■□□□□ 0.9
CASS4Q9NQ75 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASS4Q9NQ75 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.65■□□□□ 0.9
CASS4Q9NQ75 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASS4Q9NQ75 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASS4Q9NQ75 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASS4Q9NQ75 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASS4Q9NQ75 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CASS4Q9NQ75 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CASS4Q9NQ75 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CASS4Q9NQ75 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CASS4Q9NQ75 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CASS4Q9NQ75 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.64■□□□□ 0.89
CASS4Q9NQ75 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASS4Q9NQ75 KRT18P5-201ENST00000436075 1291 ntBASIC20.64■□□□□ 0.89
CASS4Q9NQ75 TERF1P5-201ENST00000477545 1207 ntBASIC20.64■□□□□ 0.89
CASS4Q9NQ75 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.64■□□□□ 0.89
CASS4Q9NQ75 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.64■□□□□ 0.89
CASS4Q9NQ75 AC022517.1-201ENST00000592429 346 ntBASIC20.64■□□□□ 0.89
CASS4Q9NQ75 AC010536.3-201ENST00000620306 533 ntBASIC20.64■□□□□ 0.89
CASS4Q9NQ75 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.64■□□□□ 0.89
CASS4Q9NQ75 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.64■□□□□ 0.89
CASS4Q9NQ75 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASS4Q9NQ75 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASS4Q9NQ75 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASS4Q9NQ75 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
CASS4Q9NQ75 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASS4Q9NQ75 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.63■□□□□ 0.89
CASS4Q9NQ75 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.63■□□□□ 0.89
CASS4Q9NQ75 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CASS4Q9NQ75 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CASS4Q9NQ75 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.63■□□□□ 0.89
CASS4Q9NQ75 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.63■□□□□ 0.89
CASS4Q9NQ75 CDV3P1-201ENST00000471403 739 ntBASIC20.63■□□□□ 0.89
CASS4Q9NQ75 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.63■□□□□ 0.89
CASS4Q9NQ75 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CASS4Q9NQ75 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
CASS4Q9NQ75 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASS4Q9NQ75 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.63■□□□□ 0.89
CASS4Q9NQ75 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASS4Q9NQ75 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASS4Q9NQ75 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 KRT8P36-201ENST00000489121 1440 ntBASIC20.62■□□□□ 0.89
CASS4Q9NQ75 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.62■□□□□ 0.89
CASS4Q9NQ75 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CASS4Q9NQ75 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.61■□□□□ 0.89
CASS4Q9NQ75 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CASS4Q9NQ75 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CASS4Q9NQ75 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CASS4Q9NQ75 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CASS4Q9NQ75 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CASS4Q9NQ75 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CASS4Q9NQ75 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
CASS4Q9NQ75 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CASS4Q9NQ75 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.61■□□□□ 0.89
CASS4Q9NQ75 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CASS4Q9NQ75 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CASS4Q9NQ75 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.61■□□□□ 0.89
CASS4Q9NQ75 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CASS4Q9NQ75 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CASS4Q9NQ75 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.61■□□□□ 0.89
CASS4Q9NQ75 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CASS4Q9NQ75 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.61■□□□□ 0.89
CASS4Q9NQ75 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms