Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.4■□□□□ 0.86
MRM3Q9HC36 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MRM3Q9HC36 AL137784.2-201ENST00000607332 1000 ntBASIC20.4■□□□□ 0.86
MRM3Q9HC36 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.4■□□□□ 0.86
MRM3Q9HC36 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MRM3Q9HC36 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MRM3Q9HC36 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.39■□□□□ 0.86
MRM3Q9HC36 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MRM3Q9HC36 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MRM3Q9HC36 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MRM3Q9HC36 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
MRM3Q9HC36 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.39■□□□□ 0.86
MRM3Q9HC36 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MRM3Q9HC36 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MRM3Q9HC36 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
MRM3Q9HC36 AC016769.1-201ENST00000409132 1010 ntBASIC20.39■□□□□ 0.85
MRM3Q9HC36 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MRM3Q9HC36 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MRM3Q9HC36 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.39■□□□□ 0.85
MRM3Q9HC36 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MRM3Q9HC36 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MRM3Q9HC36 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MRM3Q9HC36 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.39■□□□□ 0.85
MRM3Q9HC36 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRM3Q9HC36 CYP21A1P-202ENST00000354927 1481 ntBASIC20.38■□□□□ 0.85
MRM3Q9HC36 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRM3Q9HC36 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRM3Q9HC36 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
MRM3Q9HC36 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MRM3Q9HC36 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRM3Q9HC36 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
MRM3Q9HC36 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.38■□□□□ 0.85
MRM3Q9HC36 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRM3Q9HC36 DUX4L16-201ENST00000555130 1264 ntBASIC20.38■□□□□ 0.85
MRM3Q9HC36 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.38■□□□□ 0.85
MRM3Q9HC36 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.38■□□□□ 0.85
MRM3Q9HC36 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.38■□□□□ 0.85
MRM3Q9HC36 AC016405.3-201ENST00000607710 860 ntBASIC20.38■□□□□ 0.85
MRM3Q9HC36 AL356652.1-201ENST00000615962 565 ntBASIC20.38■□□□□ 0.85
MRM3Q9HC36 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRM3Q9HC36 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.38■□□□□ 0.85
MRM3Q9HC36 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
MRM3Q9HC36 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.38■□□□□ 0.85
MRM3Q9HC36 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.38■□□□□ 0.85
MRM3Q9HC36 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MRM3Q9HC36 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
MRM3Q9HC36 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
MRM3Q9HC36 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.37■□□□□ 0.85
MRM3Q9HC36 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MRM3Q9HC36 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
MRM3Q9HC36 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRM3Q9HC36 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.37■□□□□ 0.85
MRM3Q9HC36 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MRM3Q9HC36 CNN2P6-201ENST00000439038 900 ntBASIC20.37■□□□□ 0.85
MRM3Q9HC36 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.37■□□□□ 0.85
MRM3Q9HC36 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.37■□□□□ 0.85
MRM3Q9HC36 AC100791.3-201ENST00000617619 330 ntBASIC20.37■□□□□ 0.85
MRM3Q9HC36 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
MRM3Q9HC36 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRM3Q9HC36 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
MRM3Q9HC36 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRM3Q9HC36 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.37■□□□□ 0.85
MRM3Q9HC36 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRM3Q9HC36 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRM3Q9HC36 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRM3Q9HC36 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
MRM3Q9HC36 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.36■□□□□ 0.85
MRM3Q9HC36 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MRM3Q9HC36 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MRM3Q9HC36 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MRM3Q9HC36 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.36■□□□□ 0.85
MRM3Q9HC36 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.36■□□□□ 0.85
MRM3Q9HC36 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MRM3Q9HC36 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MRM3Q9HC36 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.36■□□□□ 0.85
MRM3Q9HC36 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.36■□□□□ 0.85
MRM3Q9HC36 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.36■□□□□ 0.85
MRM3Q9HC36 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
MRM3Q9HC36 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MRM3Q9HC36 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRM3Q9HC36 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.35■□□□□ 0.85
MRM3Q9HC36 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MRM3Q9HC36 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRM3Q9HC36 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.35■□□□□ 0.85
MRM3Q9HC36 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
MRM3Q9HC36 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRM3Q9HC36 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRM3Q9HC36 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MRM3Q9HC36 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRM3Q9HC36 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRM3Q9HC36 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
MRM3Q9HC36 RARRES2P4-201ENST00000514074 484 ntBASIC20.35■□□□□ 0.85
MRM3Q9HC36 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MRM3Q9HC36 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRM3Q9HC36 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRM3Q9HC36 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRM3Q9HC36 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRM3Q9HC36 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.34■□□□□ 0.85
MRM3Q9HC36 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
MRM3Q9HC36 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms