Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VRTNQ9H8Y1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VRTNQ9H8Y1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.72■■□□□ 1.07
VRTNQ9H8Y1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VRTNQ9H8Y1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VRTNQ9H8Y1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.72■■□□□ 1.07
VRTNQ9H8Y1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.72■■□□□ 1.07
VRTNQ9H8Y1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.72■■□□□ 1.07
VRTNQ9H8Y1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VRTNQ9H8Y1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.72■■□□□ 1.07
VRTNQ9H8Y1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.72■■□□□ 1.07
VRTNQ9H8Y1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VRTNQ9H8Y1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VRTNQ9H8Y1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VRTNQ9H8Y1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VRTNQ9H8Y1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
VRTNQ9H8Y1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.71■■□□□ 1.07
VRTNQ9H8Y1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VRTNQ9H8Y1 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.71■■□□□ 1.07
VRTNQ9H8Y1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.71■■□□□ 1.07
VRTNQ9H8Y1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VRTNQ9H8Y1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VRTNQ9H8Y1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VRTNQ9H8Y1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
VRTNQ9H8Y1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
VRTNQ9H8Y1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.7■■□□□ 1.07
VRTNQ9H8Y1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.7■■□□□ 1.06
VRTNQ9H8Y1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.7■■□□□ 1.06
VRTNQ9H8Y1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VRTNQ9H8Y1 AC092720.2-201ENST00000602388 1665 ntBASIC21.7■■□□□ 1.06
VRTNQ9H8Y1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.7■■□□□ 1.06
VRTNQ9H8Y1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
VRTNQ9H8Y1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.7■■□□□ 1.06
VRTNQ9H8Y1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
VRTNQ9H8Y1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
VRTNQ9H8Y1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VRTNQ9H8Y1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
VRTNQ9H8Y1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
VRTNQ9H8Y1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VRTNQ9H8Y1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.68■■□□□ 1.06
VRTNQ9H8Y1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
VRTNQ9H8Y1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
VRTNQ9H8Y1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.68■■□□□ 1.06
VRTNQ9H8Y1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VRTNQ9H8Y1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VRTNQ9H8Y1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.68■■□□□ 1.06
VRTNQ9H8Y1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.68■■□□□ 1.06
VRTNQ9H8Y1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.68■■□□□ 1.06
VRTNQ9H8Y1 HLA-B-256ENST00000639848 1089 ntBASIC21.68■■□□□ 1.06
VRTNQ9H8Y1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VRTNQ9H8Y1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VRTNQ9H8Y1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VRTNQ9H8Y1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.68■■□□□ 1.06
VRTNQ9H8Y1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
VRTNQ9H8Y1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
VRTNQ9H8Y1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VRTNQ9H8Y1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VRTNQ9H8Y1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
VRTNQ9H8Y1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VRTNQ9H8Y1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
VRTNQ9H8Y1 AP005212.1-201ENST00000581547 1997 ntBASIC21.67■■□□□ 1.06
VRTNQ9H8Y1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.67■■□□□ 1.06
VRTNQ9H8Y1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
VRTNQ9H8Y1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VRTNQ9H8Y1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VRTNQ9H8Y1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
VRTNQ9H8Y1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.67■■□□□ 1.06
VRTNQ9H8Y1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VRTNQ9H8Y1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.67■■□□□ 1.06
VRTNQ9H8Y1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.67■■□□□ 1.06
VRTNQ9H8Y1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.67■■□□□ 1.06
VRTNQ9H8Y1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VRTNQ9H8Y1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
VRTNQ9H8Y1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.66■■□□□ 1.06
VRTNQ9H8Y1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.66■■□□□ 1.06
VRTNQ9H8Y1 PTBP1P-201ENST00000554374 1601 ntBASIC21.66■■□□□ 1.06
VRTNQ9H8Y1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms