Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC30.21■■■□□ 2.43
SCAF1Q9H7N4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
SCAF1Q9H7N4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC30.2■■■□□ 2.43
SCAF1Q9H7N4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
SCAF1Q9H7N4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
SCAF1Q9H7N4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC30.2■■■□□ 2.43
SCAF1Q9H7N4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
SCAF1Q9H7N4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC30.2■■■□□ 2.42
SCAF1Q9H7N4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC30.2■■■□□ 2.42
SCAF1Q9H7N4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
SCAF1Q9H7N4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC30.2■■■□□ 2.42
SCAF1Q9H7N4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC30.2■■■□□ 2.42
SCAF1Q9H7N4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC30.2■■■□□ 2.42
SCAF1Q9H7N4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC30.2■■■□□ 2.42
SCAF1Q9H7N4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC30.2■■■□□ 2.42
SCAF1Q9H7N4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
SCAF1Q9H7N4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC30.2■■■□□ 2.42
SCAF1Q9H7N4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC30.2■■■□□ 2.42
SCAF1Q9H7N4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 RCN1P1-201ENST00000400413 996 ntBASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SCAF1Q9H7N4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SCAF1Q9H7N4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC30.18■■■□□ 2.42
SCAF1Q9H7N4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SCAF1Q9H7N4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SCAF1Q9H7N4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC30.18■■■□□ 2.42
SCAF1Q9H7N4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SCAF1Q9H7N4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SCAF1Q9H7N4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
SCAF1Q9H7N4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
SCAF1Q9H7N4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC30.18■■■□□ 2.42
SCAF1Q9H7N4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC30.18■■■□□ 2.42
SCAF1Q9H7N4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
SCAF1Q9H7N4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SCAF1Q9H7N4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
SCAF1Q9H7N4 OR2A1-AS1-201ENST00000462305 773 ntBASIC30.18■■■□□ 2.42
SCAF1Q9H7N4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC30.18■■■□□ 2.42
SCAF1Q9H7N4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC30.18■■■□□ 2.42
SCAF1Q9H7N4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC30.18■■■□□ 2.42
SCAF1Q9H7N4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SCAF1Q9H7N4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC30.17■■■□□ 2.42
SCAF1Q9H7N4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
SCAF1Q9H7N4 AC004687.1-201ENST00000579003 1625 ntBASIC30.17■■■□□ 2.42
SCAF1Q9H7N4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SCAF1Q9H7N4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
SCAF1Q9H7N4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SCAF1Q9H7N4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC30.17■■■□□ 2.42
SCAF1Q9H7N4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
SCAF1Q9H7N4 AC026471.1-201ENST00000564629 3026 ntBASIC30.16■■■□□ 2.42
SCAF1Q9H7N4 AC009237.3-201ENST00000393279 1427 ntBASIC30.16■■■□□ 2.42
SCAF1Q9H7N4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC30.16■■■□□ 2.42
SCAF1Q9H7N4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC30.16■■■□□ 2.42
SCAF1Q9H7N4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC30.16■■■□□ 2.42
SCAF1Q9H7N4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SCAF1Q9H7N4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SCAF1Q9H7N4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SCAF1Q9H7N4 AC010141.2-201ENST00000452426 721 ntBASIC30.16■■■□□ 2.42
SCAF1Q9H7N4 KRT18P20-201ENST00000548986 1279 ntBASIC30.16■■■□□ 2.42
SCAF1Q9H7N4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC30.16■■■□□ 2.42
SCAF1Q9H7N4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
SCAF1Q9H7N4 CYP2T3P-201ENST00000601990 817 ntBASIC30.16■■■□□ 2.42
SCAF1Q9H7N4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC30.16■■■□□ 2.42
SCAF1Q9H7N4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC30.15■■■□□ 2.42
SCAF1Q9H7N4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC30.15■■■□□ 2.42
SCAF1Q9H7N4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SCAF1Q9H7N4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
SCAF1Q9H7N4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC30.15■■■□□ 2.42
SCAF1Q9H7N4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SCAF1Q9H7N4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC30.15■■■□□ 2.42
SCAF1Q9H7N4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC30.15■■■□□ 2.42
SCAF1Q9H7N4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC30.15■■■□□ 2.42
SCAF1Q9H7N4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC30.15■■■□□ 2.42
SCAF1Q9H7N4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC30.15■■■□□ 2.42
SCAF1Q9H7N4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC30.15■■■□□ 2.42
SCAF1Q9H7N4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SCAF1Q9H7N4 OXCT2P1-201ENST00000447263 1535 ntBASIC30.15■■■□□ 2.42
SCAF1Q9H7N4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
SCAF1Q9H7N4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC30.14■■■□□ 2.42
SCAF1Q9H7N4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC30.14■■■□□ 2.42
SCAF1Q9H7N4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SCAF1Q9H7N4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SCAF1Q9H7N4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms