Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 FEM1AP1-201ENST00000431297 1995 ntBASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 AL589743.5-201ENST00000616611 1050 ntBASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
POLR1EQ9GZS1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.64■□□□□ 0.9
POLR1EQ9GZS1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.64■□□□□ 0.9
POLR1EQ9GZS1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
POLR1EQ9GZS1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
POLR1EQ9GZS1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
POLR1EQ9GZS1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
POLR1EQ9GZS1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
POLR1EQ9GZS1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
POLR1EQ9GZS1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLR1EQ9GZS1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
POLR1EQ9GZS1 SLC29A4P1-201ENST00000398760 971 ntBASIC20.64■□□□□ 0.89
POLR1EQ9GZS1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.64■□□□□ 0.89
POLR1EQ9GZS1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.64■□□□□ 0.89
POLR1EQ9GZS1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
POLR1EQ9GZS1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
POLR1EQ9GZS1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
POLR1EQ9GZS1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLR1EQ9GZS1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR1EQ9GZS1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR1EQ9GZS1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
POLR1EQ9GZS1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
POLR1EQ9GZS1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
POLR1EQ9GZS1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR1EQ9GZS1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
POLR1EQ9GZS1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
POLR1EQ9GZS1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.63■□□□□ 0.89
POLR1EQ9GZS1 TSPY6P-201ENST00000448518 926 ntBASIC20.63■□□□□ 0.89
POLR1EQ9GZS1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
POLR1EQ9GZS1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.63■□□□□ 0.89
POLR1EQ9GZS1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.63■□□□□ 0.89
POLR1EQ9GZS1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
POLR1EQ9GZS1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.63■□□□□ 0.89
POLR1EQ9GZS1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.63■□□□□ 0.89
POLR1EQ9GZS1 AC092720.2-201ENST00000602388 1665 ntBASIC20.63■□□□□ 0.89
POLR1EQ9GZS1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR1EQ9GZS1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR1EQ9GZS1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 GUSBP6-202ENST00000438529 1198 ntBASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 AC073314.1-201ENST00000568729 2216 ntBASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 KRT17P1-201ENST00000399211 1546 ntBASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1EQ9GZS1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1EQ9GZS1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1EQ9GZS1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1EQ9GZS1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
POLR1EQ9GZS1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1EQ9GZS1 AP005212.1-201ENST00000581547 1997 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms