Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXP3Q9BZS1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FOXP3Q9BZS1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
FOXP3Q9BZS1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
FOXP3Q9BZS1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FOXP3Q9BZS1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.99■□□□□ 0.95
FOXP3Q9BZS1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.99■□□□□ 0.95
FOXP3Q9BZS1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
FOXP3Q9BZS1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXP3Q9BZS1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.98■□□□□ 0.95
FOXP3Q9BZS1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.98■□□□□ 0.95
FOXP3Q9BZS1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXP3Q9BZS1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXP3Q9BZS1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXP3Q9BZS1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.98■□□□□ 0.95
FOXP3Q9BZS1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
FOXP3Q9BZS1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXP3Q9BZS1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXP3Q9BZS1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.98■□□□□ 0.95
FOXP3Q9BZS1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.98■□□□□ 0.95
FOXP3Q9BZS1 AC061975.6-201ENST00000579045 1553 ntBASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 POU5F1P4-201ENST00000413175 1085 ntBASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 RAP2CP1-201ENST00000605103 478 ntBASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXP3Q9BZS1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 BID-214ENST00000617586 542 ntTSL 5 BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.96■□□□□ 0.95
FOXP3Q9BZS1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FOXP3Q9BZS1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.95■□□□□ 0.94
FOXP3Q9BZS1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
FOXP3Q9BZS1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.95■□□□□ 0.94
FOXP3Q9BZS1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
FOXP3Q9BZS1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FOXP3Q9BZS1 KRT19P1-201ENST00000405746 1186 ntBASIC20.95■□□□□ 0.94
FOXP3Q9BZS1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.95■□□□□ 0.94
FOXP3Q9BZS1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
FOXP3Q9BZS1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FOXP3Q9BZS1 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.95■□□□□ 0.94
FOXP3Q9BZS1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FOXP3Q9BZS1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
FOXP3Q9BZS1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.94■□□□□ 0.94
FOXP3Q9BZS1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
FOXP3Q9BZS1 TCF3P1-201ENST00000423021 1937 ntBASIC20.94■□□□□ 0.94
FOXP3Q9BZS1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXP3Q9BZS1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.94■□□□□ 0.94
FOXP3Q9BZS1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.94■□□□□ 0.94
FOXP3Q9BZS1 AC008175.2-201ENST00000612840 297 ntBASIC20.94■□□□□ 0.94
FOXP3Q9BZS1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.94■□□□□ 0.94
FOXP3Q9BZS1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXP3Q9BZS1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXP3Q9BZS1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
FOXP3Q9BZS1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.94■□□□□ 0.94
FOXP3Q9BZS1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
FOXP3Q9BZS1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXP3Q9BZS1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
FOXP3Q9BZS1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXP3Q9BZS1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXP3Q9BZS1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXP3Q9BZS1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
FOXP3Q9BZS1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FOXP3Q9BZS1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms