Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 AC010141.2-201ENST00000452426 721 ntBASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 AP001160.3-201ENST00000601484 763 ntBASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRDL1Q9BU40 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 DUX4L2-201ENST00000561772 1275 ntBASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 DUX4L6-201ENST00000626483 1275 ntBASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 DUX4L1-201ENST00000627662 1275 ntBASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 DUX4L8-201ENST00000629013 1275 ntBASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 DUX4L3-201ENST00000630187 1275 ntBASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 DUX4L7-201ENST00000630678 1275 ntBASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 DUX4L5-201ENST00000630834 1275 ntBASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 AC121338.2-201ENST00000622535 1744 ntBASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.1■□□□□ 0.17
CHRDL1Q9BU40 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.09■□□□□ 0.17
CHRDL1Q9BU40 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHRDL1Q9BU40 AC006128.1-201ENST00000624704 1661 ntBASIC16.08■□□□□ 0.17
CHRDL1Q9BU40 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CHRDL1Q9BU40 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHRDL1Q9BU40 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CHRDL1Q9BU40 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.08■□□□□ 0.16
CHRDL1Q9BU40 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CHRDL1Q9BU40 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.08■□□□□ 0.16
CHRDL1Q9BU40 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHRDL1Q9BU40 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHRDL1Q9BU40 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHRDL1Q9BU40 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms