Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AC124283.5-201ENST00000624661 1809 ntBASIC23.56■■□□□ 1.36
PTPN18Q99952 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
PTPN18Q99952 NBPF21P-201ENST00000425093 1451 ntBASIC23.56■■□□□ 1.36
PTPN18Q99952 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.56■■□□□ 1.36
PTPN18Q99952 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTPN18Q99952 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PTPN18Q99952 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PTPN18Q99952 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTPN18Q99952 AC113347.1-201ENST00000413321 391 ntBASIC23.56■■□□□ 1.36
PTPN18Q99952 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC23.56■■□□□ 1.36
PTPN18Q99952 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC23.56■■□□□ 1.36
PTPN18Q99952 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC23.56■■□□□ 1.36
PTPN18Q99952 NUDT16P1-203ENST00000513809 620 ntBASIC23.56■■□□□ 1.36
PTPN18Q99952 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PTPN18Q99952 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.56■■□□□ 1.36
PTPN18Q99952 AC073508.3-201ENST00000619697 1419 ntBASIC23.56■■□□□ 1.36
PTPN18Q99952 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PTPN18Q99952 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTPN18Q99952 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTPN18Q99952 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC23.56■■□□□ 1.36
PTPN18Q99952 CYP2D8P-201ENST00000433633 1490 ntBASIC23.56■■□□□ 1.36
PTPN18Q99952 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PTPN18Q99952 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
PTPN18Q99952 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTPN18Q99952 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTPN18Q99952 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.55■■□□□ 1.36
PTPN18Q99952 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.55■■□□□ 1.36
PTPN18Q99952 RBM42-202ENST00000586618 771 ntTSL 3 BASIC23.55■■□□□ 1.36
PTPN18Q99952 GLDC-219ENST00000640208 420 ntTSL 2 BASIC23.55■■□□□ 1.36
PTPN18Q99952 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.55■■□□□ 1.36
PTPN18Q99952 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23.55■■□□□ 1.36
PTPN18Q99952 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTPN18Q99952 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTPN18Q99952 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTPN18Q99952 LINC01568-207ENST00000641790 1380 ntBASIC23.54■■□□□ 1.36
PTPN18Q99952 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PTPN18Q99952 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTPN18Q99952 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.54■■□□□ 1.36
PTPN18Q99952 CRAT-202ENST00000393384 973 ntTSL 2 BASIC23.54■■□□□ 1.36
PTPN18Q99952 MIR1238-201ENST00000408483 83 ntBASIC23.54■■□□□ 1.36
PTPN18Q99952 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
PTPN18Q99952 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.54■■□□□ 1.36
PTPN18Q99952 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.54■■□□□ 1.36
PTPN18Q99952 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PTPN18Q99952 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.54■■□□□ 1.36
PTPN18Q99952 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.54■■□□□ 1.36
PTPN18Q99952 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.54■■□□□ 1.36
PTPN18Q99952 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC23.54■■□□□ 1.36
PTPN18Q99952 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTPN18Q99952 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTPN18Q99952 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.53■■□□□ 1.36
PTPN18Q99952 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTPN18Q99952 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.53■■□□□ 1.36
PTPN18Q99952 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTPN18Q99952 UNC93B2-201ENST00000285383 730 ntBASIC23.53■■□□□ 1.36
PTPN18Q99952 TERF1P1-201ENST00000311003 1181 ntBASIC23.53■■□□□ 1.36
PTPN18Q99952 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PTPN18Q99952 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTPN18Q99952 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.53■■□□□ 1.36
PTPN18Q99952 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.53■■□□□ 1.36
PTPN18Q99952 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.53■■□□□ 1.36
PTPN18Q99952 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC23.53■■□□□ 1.36
PTPN18Q99952 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTPN18Q99952 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTPN18Q99952 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTPN18Q99952 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTPN18Q99952 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PTPN18Q99952 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTPN18Q99952 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.52■■□□□ 1.36
PTPN18Q99952 C1orf229-201ENST00000623686 2258 ntBASIC23.52■■□□□ 1.36
PTPN18Q99952 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.52■■□□□ 1.36
PTPN18Q99952 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTPN18Q99952 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTPN18Q99952 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
PTPN18Q99952 CFL2-205ENST00000555765 632 ntTSL 2 BASIC23.52■■□□□ 1.36
PTPN18Q99952 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC23.52■■□□□ 1.36
PTPN18Q99952 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
PTPN18Q99952 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.52■■□□□ 1.36
PTPN18Q99952 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.52■■□□□ 1.36
PTPN18Q99952 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PTPN18Q99952 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.52■■□□□ 1.36
PTPN18Q99952 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
PTPN18Q99952 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTPN18Q99952 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PTPN18Q99952 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
PTPN18Q99952 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.51■■□□□ 1.35
PTPN18Q99952 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PTPN18Q99952 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PTPN18Q99952 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTPN18Q99952 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
PTPN18Q99952 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.51■■□□□ 1.35
PTPN18Q99952 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTPN18Q99952 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
PTPN18Q99952 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTPN18Q99952 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTPN18Q99952 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PTPN18Q99952 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
PTPN18Q99952 AL390955.1-201ENST00000428694 934 ntBASIC23.5■■□□□ 1.35
PTPN18Q99952 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
PTPN18Q99952 AC104076.2-201ENST00000448912 469 ntBASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms