Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TM9SF2Q99805 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TM9SF2Q99805 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TM9SF2Q99805 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TM9SF2Q99805 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TM9SF2Q99805 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TM9SF2Q99805 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TM9SF2Q99805 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TM9SF2Q99805 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.8■□□□□ 0.6
TM9SF2Q99805 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TM9SF2Q99805 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.8■□□□□ 0.6
TM9SF2Q99805 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TM9SF2Q99805 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.8■□□□□ 0.6
TM9SF2Q99805 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TM9SF2Q99805 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TM9SF2Q99805 TERF1P5-201ENST00000477545 1207 ntBASIC18.8■□□□□ 0.6
TM9SF2Q99805 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.8■□□□□ 0.6
TM9SF2Q99805 SLC7A5P2-201ENST00000553010 536 ntBASIC18.8■□□□□ 0.6
TM9SF2Q99805 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.8■□□□□ 0.6
TM9SF2Q99805 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.8■□□□□ 0.6
TM9SF2Q99805 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TM9SF2Q99805 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TM9SF2Q99805 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.8■□□□□ 0.6
TM9SF2Q99805 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TM9SF2Q99805 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TM9SF2Q99805 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TM9SF2Q99805 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TM9SF2Q99805 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM9SF2Q99805 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
TM9SF2Q99805 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TM9SF2Q99805 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM9SF2Q99805 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM9SF2Q99805 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM9SF2Q99805 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM9SF2Q99805 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.79■□□□□ 0.6
TM9SF2Q99805 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.79■□□□□ 0.6
TM9SF2Q99805 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM9SF2Q99805 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM9SF2Q99805 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.79■□□□□ 0.6
TM9SF2Q99805 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.79■□□□□ 0.6
TM9SF2Q99805 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM9SF2Q99805 KRT16P2-201ENST00000414673 1423 ntBASIC18.79■□□□□ 0.6
TM9SF2Q99805 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
TM9SF2Q99805 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM9SF2Q99805 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TM9SF2Q99805 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.79■□□□□ 0.6
TM9SF2Q99805 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.79■□□□□ 0.6
TM9SF2Q99805 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM9SF2Q99805 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM9SF2Q99805 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TM9SF2Q99805 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TM9SF2Q99805 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.78■□□□□ 0.6
TM9SF2Q99805 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.78■□□□□ 0.6
TM9SF2Q99805 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.78■□□□□ 0.6
TM9SF2Q99805 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM9SF2Q99805 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.78■□□□□ 0.6
TM9SF2Q99805 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.78■□□□□ 0.6
TM9SF2Q99805 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TM9SF2Q99805 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM9SF2Q99805 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM9SF2Q99805 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.78■□□□□ 0.6
TM9SF2Q99805 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TM9SF2Q99805 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
TM9SF2Q99805 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TM9SF2Q99805 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.78■□□□□ 0.6
TM9SF2Q99805 AC003102.1-202ENST00000563394 1796 ntBASIC18.78■□□□□ 0.6
TM9SF2Q99805 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TM9SF2Q99805 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TM9SF2Q99805 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TM9SF2Q99805 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.77■□□□□ 0.6
TM9SF2Q99805 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TM9SF2Q99805 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM9SF2Q99805 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM9SF2Q99805 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TM9SF2Q99805 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM9SF2Q99805 CNN2P6-201ENST00000439038 900 ntBASIC18.77■□□□□ 0.6
TM9SF2Q99805 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.77■□□□□ 0.6
TM9SF2Q99805 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.77■□□□□ 0.6
TM9SF2Q99805 AC083906.2-201ENST00000511578 360 ntBASIC18.77■□□□□ 0.6
TM9SF2Q99805 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM9SF2Q99805 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM9SF2Q99805 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM9SF2Q99805 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.77■□□□□ 0.59
TM9SF2Q99805 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
TM9SF2Q99805 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.77■□□□□ 0.59
TM9SF2Q99805 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF2Q99805 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.76■□□□□ 0.59
TM9SF2Q99805 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
TM9SF2Q99805 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TM9SF2Q99805 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF2Q99805 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TM9SF2Q99805 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF2Q99805 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF2Q99805 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.76■□□□□ 0.59
TM9SF2Q99805 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF2Q99805 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF2Q99805 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF2Q99805 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF2Q99805 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.76■□□□□ 0.59
TM9SF2Q99805 AC007322.4-201ENST00000509611 723 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms