Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RPRD1AQ96P16 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RPRD1AQ96P16 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21■□□□□ 0.95
RPRD1AQ96P16 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RPRD1AQ96P16 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPRD1AQ96P16 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21■□□□□ 0.95
RPRD1AQ96P16 MYC-209ENST00000641252 345 ntBASIC21■□□□□ 0.95
RPRD1AQ96P16 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPRD1AQ96P16 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
RPRD1AQ96P16 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RPRD1AQ96P16 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RPRD1AQ96P16 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPRD1AQ96P16 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPRD1AQ96P16 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPRD1AQ96P16 CLDN5-201ENST00000403084 2357 ntBASIC21■□□□□ 0.95
RPRD1AQ96P16 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPRD1AQ96P16 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPRD1AQ96P16 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPRD1AQ96P16 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.99■□□□□ 0.95
RPRD1AQ96P16 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPRD1AQ96P16 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.99■□□□□ 0.95
RPRD1AQ96P16 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPRD1AQ96P16 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPRD1AQ96P16 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPRD1AQ96P16 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RPRD1AQ96P16 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPRD1AQ96P16 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPRD1AQ96P16 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RPRD1AQ96P16 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RPRD1AQ96P16 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.99■□□□□ 0.95
RPRD1AQ96P16 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPRD1AQ96P16 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.99■□□□□ 0.95
RPRD1AQ96P16 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPRD1AQ96P16 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPRD1AQ96P16 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPRD1AQ96P16 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.98■□□□□ 0.95
RPRD1AQ96P16 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPRD1AQ96P16 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPRD1AQ96P16 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPRD1AQ96P16 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.98■□□□□ 0.95
RPRD1AQ96P16 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.98■□□□□ 0.95
RPRD1AQ96P16 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.98■□□□□ 0.95
RPRD1AQ96P16 AC083880.1-201ENST00000608266 535 ntBASIC20.98■□□□□ 0.95
RPRD1AQ96P16 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.98■□□□□ 0.95
RPRD1AQ96P16 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RPRD1AQ96P16 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPRD1AQ96P16 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.98■□□□□ 0.95
RPRD1AQ96P16 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPRD1AQ96P16 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RPRD1AQ96P16 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPRD1AQ96P16 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPRD1AQ96P16 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPRD1AQ96P16 KRT8P36-201ENST00000489121 1440 ntBASIC20.97■□□□□ 0.95
RPRD1AQ96P16 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.97■□□□□ 0.95
RPRD1AQ96P16 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPRD1AQ96P16 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPRD1AQ96P16 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPRD1AQ96P16 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.97■□□□□ 0.95
RPRD1AQ96P16 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.97■□□□□ 0.95
RPRD1AQ96P16 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.97■□□□□ 0.95
RPRD1AQ96P16 KRT18P6-201ENST00000555540 1265 ntBASIC20.97■□□□□ 0.95
RPRD1AQ96P16 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
RPRD1AQ96P16 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.97■□□□□ 0.95
RPRD1AQ96P16 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.97■□□□□ 0.95
RPRD1AQ96P16 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RPRD1AQ96P16 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPRD1AQ96P16 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.97■□□□□ 0.95
RPRD1AQ96P16 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RPRD1AQ96P16 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPRD1AQ96P16 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RPRD1AQ96P16 AL121603.2-201ENST00000557373 2117 ntBASIC20.96■□□□□ 0.95
RPRD1AQ96P16 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPRD1AQ96P16 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.96■□□□□ 0.95
RPRD1AQ96P16 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RPRD1AQ96P16 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPRD1AQ96P16 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.96■□□□□ 0.95
RPRD1AQ96P16 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.96■□□□□ 0.95
RPRD1AQ96P16 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.96■□□□□ 0.95
RPRD1AQ96P16 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPRD1AQ96P16 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPRD1AQ96P16 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPRD1AQ96P16 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPRD1AQ96P16 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPRD1AQ96P16 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPRD1AQ96P16 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPRD1AQ96P16 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.96■□□□□ 0.95
RPRD1AQ96P16 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPRD1AQ96P16 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.96■□□□□ 0.95
RPRD1AQ96P16 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 AC007225.1-201ENST00000566331 1836 ntBASIC20.95■□□□□ 0.94
RPRD1AQ96P16 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms