Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIMD4Q96H15 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIMD4Q96H15 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TIMD4Q96H15 KRT18P29-201ENST00000397031 1267 ntBASIC17.11■□□□□ 0.33
TIMD4Q96H15 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.11■□□□□ 0.33
TIMD4Q96H15 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
TIMD4Q96H15 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
TIMD4Q96H15 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TIMD4Q96H15 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
TIMD4Q96H15 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TIMD4Q96H15 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.11■□□□□ 0.33
TIMD4Q96H15 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TIMD4Q96H15 AC092368.3-202ENST00000574180 1591 ntBASIC17.11■□□□□ 0.33
TIMD4Q96H15 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.11■□□□□ 0.33
TIMD4Q96H15 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.1■□□□□ 0.33
TIMD4Q96H15 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMD4Q96H15 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.1■□□□□ 0.33
TIMD4Q96H15 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.1■□□□□ 0.33
TIMD4Q96H15 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMD4Q96H15 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TIMD4Q96H15 ESRRAP1-201ENST00000400596 1257 ntBASIC17.1■□□□□ 0.33
TIMD4Q96H15 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.1■□□□□ 0.33
TIMD4Q96H15 C2orf69P4-201ENST00000565394 541 ntBASIC17.1■□□□□ 0.33
TIMD4Q96H15 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TIMD4Q96H15 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMD4Q96H15 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TIMD4Q96H15 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMD4Q96H15 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TIMD4Q96H15 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TIMD4Q96H15 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TIMD4Q96H15 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMD4Q96H15 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMD4Q96H15 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.1■□□□□ 0.33
TIMD4Q96H15 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMD4Q96H15 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.1■□□□□ 0.33
TIMD4Q96H15 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TIMD4Q96H15 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.09■□□□□ 0.33
TIMD4Q96H15 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMD4Q96H15 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.09■□□□□ 0.33
TIMD4Q96H15 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.09■□□□□ 0.33
TIMD4Q96H15 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMD4Q96H15 UNC93B5-201ENST00000530315 699 ntBASIC17.09■□□□□ 0.33
TIMD4Q96H15 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TIMD4Q96H15 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TIMD4Q96H15 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.09■□□□□ 0.33
TIMD4Q96H15 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TIMD4Q96H15 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TIMD4Q96H15 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.09■□□□□ 0.33
TIMD4Q96H15 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMD4Q96H15 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TIMD4Q96H15 AC121338.2-201ENST00000622535 1744 ntBASIC17.09■□□□□ 0.33
TIMD4Q96H15 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TIMD4Q96H15 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.09■□□□□ 0.33
TIMD4Q96H15 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TIMD4Q96H15 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TIMD4Q96H15 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TIMD4Q96H15 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMD4Q96H15 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TIMD4Q96H15 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TIMD4Q96H15 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMD4Q96H15 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMD4Q96H15 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.09■□□□□ 0.33
TIMD4Q96H15 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TIMD4Q96H15 AL024507.2-201ENST00000606070 2574 ntBASIC17.08■□□□□ 0.33
TIMD4Q96H15 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TIMD4Q96H15 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.08■□□□□ 0.33
TIMD4Q96H15 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TIMD4Q96H15 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TIMD4Q96H15 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMD4Q96H15 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.08■□□□□ 0.32
TIMD4Q96H15 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMD4Q96H15 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMD4Q96H15 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMD4Q96H15 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.08■□□□□ 0.32
TIMD4Q96H15 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
TIMD4Q96H15 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TIMD4Q96H15 AP003097.1-201ENST00000530657 1135 ntBASIC17.08■□□□□ 0.32
TIMD4Q96H15 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TIMD4Q96H15 ITM2C-210ENST00000620962 501 ntBASIC17.08■□□□□ 0.32
TIMD4Q96H15 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TIMD4Q96H15 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMD4Q96H15 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMD4Q96H15 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TIMD4Q96H15 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TIMD4Q96H15 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMD4Q96H15 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TIMD4Q96H15 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMD4Q96H15 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TIMD4Q96H15 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TIMD4Q96H15 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMD4Q96H15 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMD4Q96H15 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
TIMD4Q96H15 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMD4Q96H15 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
TIMD4Q96H15 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TIMD4Q96H15 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.07■□□□□ 0.32
TIMD4Q96H15 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TIMD4Q96H15 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMD4Q96H15 PNMA6B-201ENST00000538162 1200 ntBASIC17.07■□□□□ 0.32
TIMD4Q96H15 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms