Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.94■□□□□ 0.62
CTHRC1Q96CG8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTHRC1Q96CG8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTHRC1Q96CG8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 AC092667.1-201ENST00000434301 2586 ntBASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 GUSBP6-202ENST00000438529 1198 ntBASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 KRT17P1-201ENST00000399211 1546 ntBASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTHRC1Q96CG8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 AL162377.1-201ENST00000618844 1793 ntBASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 AL589743.5-201ENST00000616611 1050 ntBASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTHRC1Q96CG8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTHRC1Q96CG8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CTHRC1Q96CG8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.91■□□□□ 0.62
CTHRC1Q96CG8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTHRC1Q96CG8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTHRC1Q96CG8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTHRC1Q96CG8 GPX1P1-201ENST00000388829 606 ntBASIC18.91■□□□□ 0.62
CTHRC1Q96CG8 TSPY6P-201ENST00000448518 926 ntBASIC18.91■□□□□ 0.62
CTHRC1Q96CG8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.91■□□□□ 0.62
CTHRC1Q96CG8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTHRC1Q96CG8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTHRC1Q96CG8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CTHRC1Q96CG8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTHRC1Q96CG8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTHRC1Q96CG8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.91■□□□□ 0.62
CTHRC1Q96CG8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CTHRC1Q96CG8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTHRC1Q96CG8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTHRC1Q96CG8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.9■□□□□ 0.62
CTHRC1Q96CG8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTHRC1Q96CG8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTHRC1Q96CG8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CTHRC1Q96CG8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTHRC1Q96CG8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTHRC1Q96CG8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTHRC1Q96CG8 ID1-201ENST00000376105 1233 ntBASIC18.9■□□□□ 0.62
CTHRC1Q96CG8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTHRC1Q96CG8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTHRC1Q96CG8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.9■□□□□ 0.62
CTHRC1Q96CG8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTHRC1Q96CG8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.9■□□□□ 0.62
CTHRC1Q96CG8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTHRC1Q96CG8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.9■□□□□ 0.62
CTHRC1Q96CG8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.9■□□□□ 0.62
CTHRC1Q96CG8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.9■□□□□ 0.62
CTHRC1Q96CG8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CTHRC1Q96CG8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CTHRC1Q96CG8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.89■□□□□ 0.62
CTHRC1Q96CG8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.89■□□□□ 0.62
CTHRC1Q96CG8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTHRC1Q96CG8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.89■□□□□ 0.61
CTHRC1Q96CG8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.89■□□□□ 0.61
CTHRC1Q96CG8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.89■□□□□ 0.61
CTHRC1Q96CG8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTHRC1Q96CG8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTHRC1Q96CG8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTHRC1Q96CG8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.89■□□□□ 0.61
CTHRC1Q96CG8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.89■□□□□ 0.61
CTHRC1Q96CG8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.89■□□□□ 0.61
CTHRC1Q96CG8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CTHRC1Q96CG8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.89■□□□□ 0.61
CTHRC1Q96CG8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms