Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SH3KBP1Q96B97 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SH3KBP1Q96B97 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
SH3KBP1Q96B97 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH3KBP1Q96B97 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.11■□□□□ 0.81
SH3KBP1Q96B97 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SH3KBP1Q96B97 LSM12P1-201ENST00000411836 588 ntBASIC20.11■□□□□ 0.81
SH3KBP1Q96B97 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.11■□□□□ 0.81
SH3KBP1Q96B97 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.11■□□□□ 0.81
SH3KBP1Q96B97 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.11■□□□□ 0.81
SH3KBP1Q96B97 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.11■□□□□ 0.81
SH3KBP1Q96B97 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
SH3KBP1Q96B97 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SH3KBP1Q96B97 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH3KBP1Q96B97 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
SH3KBP1Q96B97 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SH3KBP1Q96B97 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
SH3KBP1Q96B97 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SH3KBP1Q96B97 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH3KBP1Q96B97 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH3KBP1Q96B97 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 AC098934.4-201ENST00000564127 592 ntBASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SH3KBP1Q96B97 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SH3KBP1Q96B97 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SH3KBP1Q96B97 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
SH3KBP1Q96B97 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3KBP1Q96B97 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3KBP1Q96B97 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3KBP1Q96B97 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SH3KBP1Q96B97 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.09■□□□□ 0.81
SH3KBP1Q96B97 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.09■□□□□ 0.81
SH3KBP1Q96B97 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.09■□□□□ 0.81
SH3KBP1Q96B97 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.09■□□□□ 0.81
SH3KBP1Q96B97 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.09■□□□□ 0.81
SH3KBP1Q96B97 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SH3KBP1Q96B97 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SH3KBP1Q96B97 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SH3KBP1Q96B97 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SH3KBP1Q96B97 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3KBP1Q96B97 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.09■□□□□ 0.81
SH3KBP1Q96B97 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SH3KBP1Q96B97 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH3KBP1Q96B97 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
SH3KBP1Q96B97 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH3KBP1Q96B97 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.08■□□□□ 0.81
SH3KBP1Q96B97 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH3KBP1Q96B97 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH3KBP1Q96B97 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH3KBP1Q96B97 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SH3KBP1Q96B97 MCRIP2P1-201ENST00000394346 511 ntBASIC20.08■□□□□ 0.81
SH3KBP1Q96B97 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH3KBP1Q96B97 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.08■□□□□ 0.81
SH3KBP1Q96B97 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.08■□□□□ 0.81
SH3KBP1Q96B97 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.08■□□□□ 0.81
SH3KBP1Q96B97 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.08■□□□□ 0.81
SH3KBP1Q96B97 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
SH3KBP1Q96B97 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SH3KBP1Q96B97 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
SH3KBP1Q96B97 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SH3KBP1Q96B97 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.08■□□□□ 0.8
SH3KBP1Q96B97 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SH3KBP1Q96B97 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SH3KBP1Q96B97 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SH3KBP1Q96B97 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SH3KBP1Q96B97 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.07■□□□□ 0.8
SH3KBP1Q96B97 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SH3KBP1Q96B97 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3KBP1Q96B97 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SH3KBP1Q96B97 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.07■□□□□ 0.8
SH3KBP1Q96B97 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SH3KBP1Q96B97 ABHD17AP1-201ENST00000358206 933 ntBASIC20.07■□□□□ 0.8
SH3KBP1Q96B97 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SH3KBP1Q96B97 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.07■□□□□ 0.8
SH3KBP1Q96B97 AC091874.3-201ENST00000512672 1195 ntBASIC20.07■□□□□ 0.8
SH3KBP1Q96B97 CYP2T3P-201ENST00000601990 817 ntBASIC20.07■□□□□ 0.8
SH3KBP1Q96B97 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.07■□□□□ 0.8
SH3KBP1Q96B97 AC116050.2-201ENST00000612102 1779 ntBASIC20.07■□□□□ 0.8
SH3KBP1Q96B97 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3KBP1Q96B97 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3KBP1Q96B97 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SH3KBP1Q96B97 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms