Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHC3Q92529 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHC3Q92529 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SHC3Q92529 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.77■■□□□ 1.08
SHC3Q92529 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SHC3Q92529 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHC3Q92529 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SHC3Q92529 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.77■■□□□ 1.08
SHC3Q92529 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHC3Q92529 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.77■■□□□ 1.08
SHC3Q92529 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
SHC3Q92529 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHC3Q92529 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.76■■□□□ 1.07
SHC3Q92529 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.76■■□□□ 1.07
SHC3Q92529 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHC3Q92529 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.76■■□□□ 1.07
SHC3Q92529 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHC3Q92529 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SHC3Q92529 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.76■■□□□ 1.07
SHC3Q92529 AC004911.1-201ENST00000416316 871 ntBASIC21.76■■□□□ 1.07
SHC3Q92529 PGM5P4-201ENST00000421970 445 ntBASIC21.76■■□□□ 1.07
SHC3Q92529 AC007322.1-201ENST00000426983 750 ntBASIC21.76■■□□□ 1.07
SHC3Q92529 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.76■■□□□ 1.07
SHC3Q92529 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SHC3Q92529 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.76■■□□□ 1.07
SHC3Q92529 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SHC3Q92529 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.76■■□□□ 1.07
SHC3Q92529 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.76■■□□□ 1.07
SHC3Q92529 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.76■■□□□ 1.07
SHC3Q92529 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHC3Q92529 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHC3Q92529 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHC3Q92529 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SHC3Q92529 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHC3Q92529 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHC3Q92529 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHC3Q92529 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.75■■□□□ 1.07
SHC3Q92529 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.75■■□□□ 1.07
SHC3Q92529 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SHC3Q92529 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHC3Q92529 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SHC3Q92529 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHC3Q92529 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SHC3Q92529 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SHC3Q92529 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHC3Q92529 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
SHC3Q92529 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.75■■□□□ 1.07
SHC3Q92529 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.75■■□□□ 1.07
SHC3Q92529 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SHC3Q92529 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.75■■□□□ 1.07
SHC3Q92529 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHC3Q92529 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHC3Q92529 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHC3Q92529 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHC3Q92529 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHC3Q92529 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.74■■□□□ 1.07
SHC3Q92529 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHC3Q92529 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
SHC3Q92529 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHC3Q92529 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SHC3Q92529 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.74■■□□□ 1.07
SHC3Q92529 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.74■■□□□ 1.07
SHC3Q92529 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.74■■□□□ 1.07
SHC3Q92529 AC099778.1-201ENST00000568593 1911 ntBASIC21.74■■□□□ 1.07
SHC3Q92529 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHC3Q92529 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.74■■□□□ 1.07
SHC3Q92529 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SHC3Q92529 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.74■■□□□ 1.07
SHC3Q92529 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHC3Q92529 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SHC3Q92529 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SHC3Q92529 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHC3Q92529 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SHC3Q92529 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHC3Q92529 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.73■■□□□ 1.07
SHC3Q92529 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.73■■□□□ 1.07
SHC3Q92529 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHC3Q92529 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHC3Q92529 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHC3Q92529 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SHC3Q92529 MCRIP2P1-201ENST00000394346 511 ntBASIC21.73■■□□□ 1.07
SHC3Q92529 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.73■■□□□ 1.07
SHC3Q92529 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.73■■□□□ 1.07
SHC3Q92529 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SHC3Q92529 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.73■■□□□ 1.07
SHC3Q92529 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.73■■□□□ 1.07
SHC3Q92529 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHC3Q92529 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHC3Q92529 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.73■■□□□ 1.07
SHC3Q92529 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHC3Q92529 SMG8-203ENST00000578922 2178 ntBASIC21.72■■□□□ 1.07
SHC3Q92529 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHC3Q92529 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.72■■□□□ 1.07
SHC3Q92529 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SHC3Q92529 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.72■■□□□ 1.07
SHC3Q92529 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHC3Q92529 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.72■■□□□ 1.07
SHC3Q92529 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHC3Q92529 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.72■■□□□ 1.07
SHC3Q92529 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms