Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC25■■□□□ 1.59
SNED1Q8TER0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SNED1Q8TER0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC25■■□□□ 1.59
SNED1Q8TER0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SNED1Q8TER0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC25■■□□□ 1.59
SNED1Q8TER0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SNED1Q8TER0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SNED1Q8TER0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC24.99■■□□□ 1.59
SNED1Q8TER0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC24.99■■□□□ 1.59
SNED1Q8TER0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
SNED1Q8TER0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SNED1Q8TER0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SNED1Q8TER0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SNED1Q8TER0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SNED1Q8TER0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SNED1Q8TER0 GUSBP5-202ENST00000510805 1989 ntBASIC24.99■■□□□ 1.59
SNED1Q8TER0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SNED1Q8TER0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SNED1Q8TER0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SNED1Q8TER0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SNED1Q8TER0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SNED1Q8TER0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
SNED1Q8TER0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
SNED1Q8TER0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SNED1Q8TER0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC24.98■■□□□ 1.59
SNED1Q8TER0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC24.98■■□□□ 1.59
SNED1Q8TER0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SNED1Q8TER0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC24.98■■□□□ 1.59
SNED1Q8TER0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
SNED1Q8TER0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC24.98■■□□□ 1.59
SNED1Q8TER0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
SNED1Q8TER0 AC233723.2-201ENST00000623798 2106 ntBASIC24.97■■□□□ 1.59
SNED1Q8TER0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC24.97■■□□□ 1.59
SNED1Q8TER0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC24.97■■□□□ 1.59
SNED1Q8TER0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC24.97■■□□□ 1.59
SNED1Q8TER0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC24.97■■□□□ 1.59
SNED1Q8TER0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC24.97■■□□□ 1.59
SNED1Q8TER0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC24.97■■□□□ 1.59
SNED1Q8TER0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC24.97■■□□□ 1.59
SNED1Q8TER0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNED1Q8TER0 AC145285.6-201ENST00000604632 637 ntBASIC24.97■■□□□ 1.59
SNED1Q8TER0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC24.97■■□□□ 1.59
SNED1Q8TER0 KRT8P9-201ENST00000558927 1449 ntBASIC24.97■■□□□ 1.59
SNED1Q8TER0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNED1Q8TER0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNED1Q8TER0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNED1Q8TER0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SNED1Q8TER0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SNED1Q8TER0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
SNED1Q8TER0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
SNED1Q8TER0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC24.96■■□□□ 1.59
SNED1Q8TER0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
SNED1Q8TER0 AL121829.2-201ENST00000620908 328 ntBASIC24.96■■□□□ 1.59
SNED1Q8TER0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC24.96■■□□□ 1.59
SNED1Q8TER0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SNED1Q8TER0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SNED1Q8TER0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SNED1Q8TER0 AC242852.2-201ENST00000615738 1807 ntBASIC24.96■■□□□ 1.59
SNED1Q8TER0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SNED1Q8TER0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SNED1Q8TER0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24.96■■□□□ 1.59
SNED1Q8TER0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC24.96■■□□□ 1.59
SNED1Q8TER0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
SNED1Q8TER0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC24.95■■□□□ 1.59
SNED1Q8TER0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC24.95■■□□□ 1.59
SNED1Q8TER0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
SNED1Q8TER0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
SNED1Q8TER0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC24.95■■□□□ 1.58
SNED1Q8TER0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC24.95■■□□□ 1.58
SNED1Q8TER0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
SNED1Q8TER0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SNED1Q8TER0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC24.95■■□□□ 1.58
SNED1Q8TER0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC24.95■■□□□ 1.58
SNED1Q8TER0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SNED1Q8TER0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC24.95■■□□□ 1.58
SNED1Q8TER0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SNED1Q8TER0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
SNED1Q8TER0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.95■■□□□ 1.58
SNED1Q8TER0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
SNED1Q8TER0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC24.95■■□□□ 1.58
SNED1Q8TER0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC24.95■■□□□ 1.58
SNED1Q8TER0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SNED1Q8TER0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC24.94■■□□□ 1.58
SNED1Q8TER0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SNED1Q8TER0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SNED1Q8TER0 MMP23A-201ENST00000234610 1017 ntBASIC24.94■■□□□ 1.58
SNED1Q8TER0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SNED1Q8TER0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SNED1Q8TER0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC24.94■■□□□ 1.58
SNED1Q8TER0 KRT16P5-201ENST00000455284 522 ntBASIC24.94■■□□□ 1.58
SNED1Q8TER0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC24.94■■□□□ 1.58
SNED1Q8TER0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC24.94■■□□□ 1.58
SNED1Q8TER0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC24.94■■□□□ 1.58
SNED1Q8TER0 MIR6786-201ENST00000616843 113 ntBASIC24.94■■□□□ 1.58
SNED1Q8TER0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SNED1Q8TER0 HTR7P1-201ENST00000538670 1336 ntBASIC24.93■■□□□ 1.58
SNED1Q8TER0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
SNED1Q8TER0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SNED1Q8TER0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SNED1Q8TER0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms