Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.17■□□□□ 0.98
SH3RF2Q8TEC5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3RF2Q8TEC5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.17■□□□□ 0.98
SH3RF2Q8TEC5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SH3RF2Q8TEC5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SH3RF2Q8TEC5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3RF2Q8TEC5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3RF2Q8TEC5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF2Q8TEC5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF2Q8TEC5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.16■□□□□ 0.98
SH3RF2Q8TEC5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF2Q8TEC5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SH3RF2Q8TEC5 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF2Q8TEC5 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.16■□□□□ 0.98
SH3RF2Q8TEC5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SH3RF2Q8TEC5 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF2Q8TEC5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SH3RF2Q8TEC5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.16■□□□□ 0.98
SH3RF2Q8TEC5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.16■□□□□ 0.98
SH3RF2Q8TEC5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF2Q8TEC5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF2Q8TEC5 AF106564.1-201ENST00000607058 2553 ntBASIC21.16■□□□□ 0.98
SH3RF2Q8TEC5 Z98882.1-201ENST00000622160 2253 ntBASIC21.16■□□□□ 0.98
SH3RF2Q8TEC5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF2Q8TEC5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
SH3RF2Q8TEC5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF2Q8TEC5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SH3RF2Q8TEC5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SH3RF2Q8TEC5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SH3RF2Q8TEC5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.15■□□□□ 0.98
SH3RF2Q8TEC5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SH3RF2Q8TEC5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.15■□□□□ 0.98
SH3RF2Q8TEC5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.15■□□□□ 0.98
SH3RF2Q8TEC5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
SH3RF2Q8TEC5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.15■□□□□ 0.98
SH3RF2Q8TEC5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.15■□□□□ 0.98
SH3RF2Q8TEC5 AC233263.1-201ENST00000578059 224 ntBASIC21.15■□□□□ 0.98
SH3RF2Q8TEC5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.15■□□□□ 0.98
SH3RF2Q8TEC5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3RF2Q8TEC5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3RF2Q8TEC5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3RF2Q8TEC5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3RF2Q8TEC5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SH3RF2Q8TEC5 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SH3RF2Q8TEC5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SH3RF2Q8TEC5 AC011484.1-201ENST00000377652 1995 ntBASIC21.14■□□□□ 0.98
SH3RF2Q8TEC5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
SH3RF2Q8TEC5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3RF2Q8TEC5 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
SH3RF2Q8TEC5 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3RF2Q8TEC5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3RF2Q8TEC5 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.14■□□□□ 0.97
SH3RF2Q8TEC5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.14■□□□□ 0.97
SH3RF2Q8TEC5 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.14■□□□□ 0.97
SH3RF2Q8TEC5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SH3RF2Q8TEC5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.14■□□□□ 0.97
SH3RF2Q8TEC5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.14■□□□□ 0.97
SH3RF2Q8TEC5 AL359736.2-201ENST00000621992 437 ntBASIC21.14■□□□□ 0.97
SH3RF2Q8TEC5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.14■□□□□ 0.97
SH3RF2Q8TEC5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3RF2Q8TEC5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3RF2Q8TEC5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3RF2Q8TEC5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.13■□□□□ 0.97
SH3RF2Q8TEC5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3RF2Q8TEC5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.13■□□□□ 0.97
SH3RF2Q8TEC5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3RF2Q8TEC5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.13■□□□□ 0.97
SH3RF2Q8TEC5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SH3RF2Q8TEC5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3RF2Q8TEC5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
SH3RF2Q8TEC5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.13■□□□□ 0.97
SH3RF2Q8TEC5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.13■□□□□ 0.97
SH3RF2Q8TEC5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3RF2Q8TEC5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3RF2Q8TEC5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SH3RF2Q8TEC5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3RF2Q8TEC5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 C1QBPP2-201ENST00000528754 825 ntBASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 AC069544.1-201ENST00000609399 999 ntBASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.12■□□□□ 0.97
SH3RF2Q8TEC5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms