Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 KRASP1-201ENST00000407852 552 ntBASIC25.34■■□□□ 1.65
DDX60Q8IY21 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC25.34■■□□□ 1.65
DDX60Q8IY21 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC25.34■■□□□ 1.65
DDX60Q8IY21 BRWD1-AS2-201ENST00000603064 1028 ntBASIC25.34■■□□□ 1.65
DDX60Q8IY21 AC006557.6-201ENST00000623071 864 ntBASIC25.34■■□□□ 1.65
DDX60Q8IY21 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC25.34■■□□□ 1.65
DDX60Q8IY21 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DDX60Q8IY21 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
DDX60Q8IY21 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC25.34■■□□□ 1.65
DDX60Q8IY21 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
DDX60Q8IY21 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
DDX60Q8IY21 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC25.33■■□□□ 1.65
DDX60Q8IY21 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC25.33■■□□□ 1.65
DDX60Q8IY21 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
DDX60Q8IY21 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC25.33■■□□□ 1.65
DDX60Q8IY21 LINC00565-201ENST00000562710 2331 ntBASIC25.33■■□□□ 1.65
DDX60Q8IY21 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
DDX60Q8IY21 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
DDX60Q8IY21 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC25.33■■□□□ 1.64
DDX60Q8IY21 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
DDX60Q8IY21 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
DDX60Q8IY21 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX60Q8IY21 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
DDX60Q8IY21 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX60Q8IY21 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC25.32■■□□□ 1.64
DDX60Q8IY21 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX60Q8IY21 AL023875.1-201ENST00000640777 796 ntBASIC25.32■■□□□ 1.64
DDX60Q8IY21 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX60Q8IY21 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX60Q8IY21 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
DDX60Q8IY21 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
DDX60Q8IY21 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC25.32■■□□□ 1.64
DDX60Q8IY21 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX60Q8IY21 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX60Q8IY21 ABHD17AP6-201ENST00000458502 1044 ntBASIC25.32■■□□□ 1.64
DDX60Q8IY21 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX60Q8IY21 Six3os1_6.1-201ENST00000620790 196 ntBASIC25.32■■□□□ 1.64
DDX60Q8IY21 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC25.31■■□□□ 1.64
DDX60Q8IY21 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
DDX60Q8IY21 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
DDX60Q8IY21 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC25.31■■□□□ 1.64
DDX60Q8IY21 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
DDX60Q8IY21 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
DDX60Q8IY21 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC25.31■■□□□ 1.64
DDX60Q8IY21 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
DDX60Q8IY21 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
DDX60Q8IY21 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
DDX60Q8IY21 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC25.31■■□□□ 1.64
DDX60Q8IY21 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
DDX60Q8IY21 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC25.31■■□□□ 1.64
DDX60Q8IY21 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
DDX60Q8IY21 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
DDX60Q8IY21 AC120498.8-201ENST00000614275 531 ntBASIC25.31■■□□□ 1.64
DDX60Q8IY21 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC25.31■■□□□ 1.64
DDX60Q8IY21 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC25.31■■□□□ 1.64
DDX60Q8IY21 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX60Q8IY21 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
DDX60Q8IY21 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX60Q8IY21 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX60Q8IY21 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX60Q8IY21 RPS2P55-201ENST00000397318 883 ntBASIC25.3■■□□□ 1.64
DDX60Q8IY21 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
DDX60Q8IY21 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
DDX60Q8IY21 AC107956.1-201ENST00000494359 873 ntBASIC25.3■■□□□ 1.64
DDX60Q8IY21 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC25.3■■□□□ 1.64
DDX60Q8IY21 AC011484.1-201ENST00000377652 1995 ntBASIC25.3■■□□□ 1.64
DDX60Q8IY21 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
DDX60Q8IY21 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX60Q8IY21 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
DDX60Q8IY21 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX60Q8IY21 AL024507.2-201ENST00000606070 2574 ntBASIC25.3■■□□□ 1.64
DDX60Q8IY21 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX60Q8IY21 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
DDX60Q8IY21 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC25.29■■□□□ 1.64
DDX60Q8IY21 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
DDX60Q8IY21 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC25.29■■□□□ 1.64
DDX60Q8IY21 DHDH-203ENST00000522614 776 ntTSL 5 BASIC25.29■■□□□ 1.64
DDX60Q8IY21 AL355075.4-201ENST00000554988 638 ntBASIC25.29■■□□□ 1.64
DDX60Q8IY21 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC25.29■■□□□ 1.64
DDX60Q8IY21 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
DDX60Q8IY21 AC233702.5-201ENST00000584107 538 ntBASIC25.29■■□□□ 1.64
DDX60Q8IY21 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
DDX60Q8IY21 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
DDX60Q8IY21 KRT8P36-201ENST00000489121 1440 ntBASIC25.29■■□□□ 1.64
DDX60Q8IY21 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
DDX60Q8IY21 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
DDX60Q8IY21 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
DDX60Q8IY21 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
DDX60Q8IY21 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
DDX60Q8IY21 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
DDX60Q8IY21 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
DDX60Q8IY21 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
DDX60Q8IY21 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
DDX60Q8IY21 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
DDX60Q8IY21 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
DDX60Q8IY21 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
DDX60Q8IY21 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
DDX60Q8IY21 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
DDX60Q8IY21 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC25.28■■□□□ 1.64
DDX60Q8IY21 PTBP1P-201ENST00000554374 1601 ntBASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms