Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.79
TRIM48Q8IWZ4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM48Q8IWZ4 AC087633.2-202ENST00000565166 1439 ntBASIC19.94■□□□□ 0.78
TRIM48Q8IWZ4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
TRIM48Q8IWZ4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TRIM48Q8IWZ4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM48Q8IWZ4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
TRIM48Q8IWZ4 AC011484.1-201ENST00000377652 1995 ntBASIC19.94■□□□□ 0.78
TRIM48Q8IWZ4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TRIM48Q8IWZ4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM48Q8IWZ4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM48Q8IWZ4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM48Q8IWZ4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM48Q8IWZ4 TSPY20P-201ENST00000450910 630 ntBASIC19.94■□□□□ 0.78
TRIM48Q8IWZ4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.94■□□□□ 0.78
TRIM48Q8IWZ4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM48Q8IWZ4 AC105020.6-201ENST00000621523 1217 ntBASIC19.94■□□□□ 0.78
TRIM48Q8IWZ4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TRIM48Q8IWZ4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM48Q8IWZ4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 AL049796.1-201ENST00000565336 1766 ntBASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 FAM201B-201ENST00000458407 597 ntBASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM48Q8IWZ4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM48Q8IWZ4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
TRIM48Q8IWZ4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.92■□□□□ 0.78
TRIM48Q8IWZ4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRIM48Q8IWZ4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM48Q8IWZ4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM48Q8IWZ4 ABHD17AP1-201ENST00000358206 933 ntBASIC19.92■□□□□ 0.78
TRIM48Q8IWZ4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.92■□□□□ 0.78
TRIM48Q8IWZ4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM48Q8IWZ4 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM48Q8IWZ4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TRIM48Q8IWZ4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.92■□□□□ 0.78
TRIM48Q8IWZ4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM48Q8IWZ4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM48Q8IWZ4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.92■□□□□ 0.78
TRIM48Q8IWZ4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM48Q8IWZ4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM48Q8IWZ4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM48Q8IWZ4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM48Q8IWZ4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM48Q8IWZ4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms