Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC44A2Q8IWA5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC44A2Q8IWA5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC44A2Q8IWA5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC44A2Q8IWA5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC44A2Q8IWA5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SLC44A2Q8IWA5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC44A2Q8IWA5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC44A2Q8IWA5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SLC44A2Q8IWA5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC44A2Q8IWA5 AC007225.1-201ENST00000566331 1836 ntBASIC19.3■□□□□ 0.68
SLC44A2Q8IWA5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC44A2Q8IWA5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC44A2Q8IWA5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC44A2Q8IWA5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC44A2Q8IWA5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC44A2Q8IWA5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC44A2Q8IWA5 AC245052.3-201ENST00000450182 901 ntBASIC19.3■□□□□ 0.68
SLC44A2Q8IWA5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.3■□□□□ 0.68
SLC44A2Q8IWA5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC44A2Q8IWA5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC44A2Q8IWA5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SLC44A2Q8IWA5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
SLC44A2Q8IWA5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.3■□□□□ 0.68
SLC44A2Q8IWA5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC44A2Q8IWA5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SLC44A2Q8IWA5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC44A2Q8IWA5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A2Q8IWA5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A2Q8IWA5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A2Q8IWA5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A2Q8IWA5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A2Q8IWA5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC44A2Q8IWA5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A2Q8IWA5 AC016769.1-201ENST00000409132 1010 ntBASIC19.29■□□□□ 0.68
SLC44A2Q8IWA5 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A2Q8IWA5 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A2Q8IWA5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SLC44A2Q8IWA5 AP005212.1-201ENST00000581547 1997 ntBASIC19.29■□□□□ 0.68
SLC44A2Q8IWA5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A2Q8IWA5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SLC44A2Q8IWA5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 SLC7A5P1-201ENST00000568957 537 ntBASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 MYCNOS-205ENST00000641950 531 ntBASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 AC027702.1-201ENST00000563810 1770 ntBASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SLC44A2Q8IWA5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A2Q8IWA5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
SLC44A2Q8IWA5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
SLC44A2Q8IWA5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A2Q8IWA5 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A2Q8IWA5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A2Q8IWA5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC44A2Q8IWA5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.27■□□□□ 0.68
SLC44A2Q8IWA5 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC44A2Q8IWA5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC44A2Q8IWA5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A2Q8IWA5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A2Q8IWA5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A2Q8IWA5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A2Q8IWA5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A2Q8IWA5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SLC44A2Q8IWA5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A2Q8IWA5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A2Q8IWA5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.27■□□□□ 0.67
SLC44A2Q8IWA5 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
SLC44A2Q8IWA5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC44A2Q8IWA5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC44A2Q8IWA5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC44A2Q8IWA5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC44A2Q8IWA5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SLC44A2Q8IWA5 GABARAPL3-202ENST00000624044 1851 ntBASIC19.26■□□□□ 0.67
SLC44A2Q8IWA5 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A2Q8IWA5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A2Q8IWA5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC44A2Q8IWA5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SLC44A2Q8IWA5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A2Q8IWA5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SLC44A2Q8IWA5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms