Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SLC7A5P1-201ENST00000568957 537 ntBASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 AC243732.1-201ENST00000612648 864 ntBASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 MIR2861-201ENST00000636310 90 ntBASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 MYCNOS-205ENST00000641950 531 ntBASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
LINC00346Q8IVM7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
LINC00346Q8IVM7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC00346Q8IVM7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18■□□□□ 0.47
LINC00346Q8IVM7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC00346Q8IVM7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC00346Q8IVM7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC00346Q8IVM7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC00346Q8IVM7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC00346Q8IVM7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LINC00346Q8IVM7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18■□□□□ 0.47
LINC00346Q8IVM7 AC007322.3-201ENST00000426526 701 ntBASIC18■□□□□ 0.47
LINC00346Q8IVM7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18■□□□□ 0.47
LINC00346Q8IVM7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18■□□□□ 0.47
LINC00346Q8IVM7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18■□□□□ 0.47
LINC00346Q8IVM7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18■□□□□ 0.47
LINC00346Q8IVM7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18■□□□□ 0.47
LINC00346Q8IVM7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC00346Q8IVM7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC00346Q8IVM7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18■□□□□ 0.47
LINC00346Q8IVM7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LINC00346Q8IVM7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LINC00346Q8IVM7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 MIR6821-201ENST00000617625 74 ntBASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.99■□□□□ 0.47
LINC00346Q8IVM7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 AL162377.1-201ENST00000618844 1793 ntBASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.98■□□□□ 0.47
LINC00346Q8IVM7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms