Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 C2orf69P4-201ENST00000565394 541 ntBASIC20.01■□□□□ 0.79
LRRTM4Q86VH4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.01■□□□□ 0.79
LRRTM4Q86VH4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRTM4Q86VH4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRRTM4Q86VH4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
LRRTM4Q86VH4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
LRRTM4Q86VH4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.01■□□□□ 0.79
LRRTM4Q86VH4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.01■□□□□ 0.79
LRRTM4Q86VH4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRTM4Q86VH4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
LRRTM4Q86VH4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRTM4Q86VH4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LRRTM4Q86VH4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20■□□□□ 0.79
LRRTM4Q86VH4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRTM4Q86VH4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20■□□□□ 0.79
LRRTM4Q86VH4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
LRRTM4Q86VH4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRRTM4Q86VH4 RNA5SP413-201ENST00000516373 109 ntBASIC20■□□□□ 0.79
LRRTM4Q86VH4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20■□□□□ 0.79
LRRTM4Q86VH4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LRRTM4Q86VH4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LRRTM4Q86VH4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LRRTM4Q86VH4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRTM4Q86VH4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRTM4Q86VH4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.99■□□□□ 0.79
LRRTM4Q86VH4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
LRRTM4Q86VH4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRTM4Q86VH4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRTM4Q86VH4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
LRRTM4Q86VH4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.99■□□□□ 0.79
LRRTM4Q86VH4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.99■□□□□ 0.79
LRRTM4Q86VH4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.99■□□□□ 0.79
LRRTM4Q86VH4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.99■□□□□ 0.79
LRRTM4Q86VH4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRRTM4Q86VH4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.99■□□□□ 0.79
LRRTM4Q86VH4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.99■□□□□ 0.79
LRRTM4Q86VH4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.99■□□□□ 0.79
LRRTM4Q86VH4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRRTM4Q86VH4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRTM4Q86VH4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.99■□□□□ 0.79
LRRTM4Q86VH4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRTM4Q86VH4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRTM4Q86VH4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRTM4Q86VH4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.98■□□□□ 0.79
LRRTM4Q86VH4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.98■□□□□ 0.79
LRRTM4Q86VH4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.98■□□□□ 0.79
LRRTM4Q86VH4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.98■□□□□ 0.79
LRRTM4Q86VH4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.98■□□□□ 0.79
LRRTM4Q86VH4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.98■□□□□ 0.79
LRRTM4Q86VH4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRTM4Q86VH4 FP700111.2-201ENST00000619190 1892 ntBASIC19.98■□□□□ 0.79
LRRTM4Q86VH4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
LRRTM4Q86VH4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.98■□□□□ 0.79
LRRTM4Q86VH4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRTM4Q86VH4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRTM4Q86VH4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.97■□□□□ 0.79
LRRTM4Q86VH4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.97■□□□□ 0.79
LRRTM4Q86VH4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.97■□□□□ 0.79
LRRTM4Q86VH4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRTM4Q86VH4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRTM4Q86VH4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRTM4Q86VH4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
LRRTM4Q86VH4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.97■□□□□ 0.79
LRRTM4Q86VH4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.97■□□□□ 0.79
LRRTM4Q86VH4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRTM4Q86VH4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.97■□□□□ 0.79
LRRTM4Q86VH4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.97■□□□□ 0.79
LRRTM4Q86VH4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.97■□□□□ 0.79
LRRTM4Q86VH4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.97■□□□□ 0.79
LRRTM4Q86VH4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRRTM4Q86VH4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LRRTM4Q86VH4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
LRRTM4Q86VH4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRTM4Q86VH4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRTM4Q86VH4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.96■□□□□ 0.79
LRRTM4Q86VH4 AL137060.1-201ENST00000618151 2648 ntBASIC19.96■□□□□ 0.79
LRRTM4Q86VH4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LRRTM4Q86VH4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRTM4Q86VH4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRTM4Q86VH4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRTM4Q86VH4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.96■□□□□ 0.79
LRRTM4Q86VH4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRTM4Q86VH4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRTM4Q86VH4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.96■□□□□ 0.79
LRRTM4Q86VH4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.96■□□□□ 0.79
LRRTM4Q86VH4 HLA-B-256ENST00000639848 1089 ntBASIC19.96■□□□□ 0.79
LRRTM4Q86VH4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
LRRTM4Q86VH4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRTM4Q86VH4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRTM4Q86VH4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
LRRTM4Q86VH4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRTM4Q86VH4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LRRTM4Q86VH4 AC007225.1-201ENST00000566331 1836 ntBASIC19.95■□□□□ 0.78
LRRTM4Q86VH4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRTM4Q86VH4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRTM4Q86VH4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRTM4Q86VH4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRTM4Q86VH4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRTM4Q86VH4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRTM4Q86VH4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms