Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 AL390955.1-201ENST00000428694 934 ntBASIC24.29■■□□□ 1.48
USP50Q70EL3 AC116562.2-201ENST00000507042 360 ntBASIC24.29■■□□□ 1.48
USP50Q70EL3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC24.29■■□□□ 1.48
USP50Q70EL3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC24.29■■□□□ 1.48
USP50Q70EL3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
USP50Q70EL3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
USP50Q70EL3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
USP50Q70EL3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC24.28■■□□□ 1.48
USP50Q70EL3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC24.28■■□□□ 1.48
USP50Q70EL3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC24.28■■□□□ 1.48
USP50Q70EL3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
USP50Q70EL3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
USP50Q70EL3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
USP50Q70EL3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC24.28■■□□□ 1.48
USP50Q70EL3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC24.28■■□□□ 1.48
USP50Q70EL3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC24.28■■□□□ 1.48
USP50Q70EL3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC24.28■■□□□ 1.48
USP50Q70EL3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
USP50Q70EL3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC24.28■■□□□ 1.48
USP50Q70EL3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
USP50Q70EL3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
USP50Q70EL3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
USP50Q70EL3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC24.27■■□□□ 1.48
USP50Q70EL3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
USP50Q70EL3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
USP50Q70EL3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
USP50Q70EL3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
USP50Q70EL3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
USP50Q70EL3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC24.27■■□□□ 1.48
USP50Q70EL3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
USP50Q70EL3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
USP50Q70EL3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC24.26■■□□□ 1.47
USP50Q70EL3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
USP50Q70EL3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC24.26■■□□□ 1.47
USP50Q70EL3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC24.26■■□□□ 1.47
USP50Q70EL3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC24.26■■□□□ 1.47
USP50Q70EL3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
USP50Q70EL3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC24.26■■□□□ 1.47
USP50Q70EL3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC24.26■■□□□ 1.47
USP50Q70EL3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
USP50Q70EL3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.25■■□□□ 1.47
USP50Q70EL3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.25■■□□□ 1.47
USP50Q70EL3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
USP50Q70EL3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
USP50Q70EL3 AC023632.3-201ENST00000521633 145 ntBASIC24.25■■□□□ 1.47
USP50Q70EL3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC24.25■■□□□ 1.47
USP50Q70EL3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC24.25■■□□□ 1.47
USP50Q70EL3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
USP50Q70EL3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
USP50Q70EL3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
USP50Q70EL3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
USP50Q70EL3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.25■■□□□ 1.47
USP50Q70EL3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
USP50Q70EL3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC24.25■■□□□ 1.47
USP50Q70EL3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC24.24■■□□□ 1.47
USP50Q70EL3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC24.24■■□□□ 1.47
USP50Q70EL3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC24.24■■□□□ 1.47
USP50Q70EL3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC24.24■■□□□ 1.47
USP50Q70EL3 WWOX-216ENST00000569818 525 ntBASIC24.24■■□□□ 1.47
USP50Q70EL3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
USP50Q70EL3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
USP50Q70EL3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC24.24■■□□□ 1.47
USP50Q70EL3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
USP50Q70EL3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
USP50Q70EL3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC24.23■■□□□ 1.47
USP50Q70EL3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
USP50Q70EL3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC24.23■■□□□ 1.47
USP50Q70EL3 AL121906.2-201ENST00000621597 723 ntBASIC24.23■■□□□ 1.47
USP50Q70EL3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
USP50Q70EL3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
USP50Q70EL3 FAM99A-202ENST00000538190 1989 ntBASIC24.23■■□□□ 1.47
USP50Q70EL3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
USP50Q70EL3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
USP50Q70EL3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
USP50Q70EL3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
USP50Q70EL3 AC124283.5-201ENST00000624661 1809 ntBASIC24.22■■□□□ 1.47
USP50Q70EL3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
USP50Q70EL3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC24.22■■□□□ 1.47
USP50Q70EL3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
USP50Q70EL3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC24.22■■□□□ 1.47
USP50Q70EL3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
USP50Q70EL3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
USP50Q70EL3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC24.22■■□□□ 1.47
USP50Q70EL3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC24.22■■□□□ 1.47
USP50Q70EL3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC24.22■■□□□ 1.47
USP50Q70EL3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC24.22■■□□□ 1.47
USP50Q70EL3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC24.22■■□□□ 1.47
USP50Q70EL3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC24.22■■□□□ 1.47
USP50Q70EL3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
USP50Q70EL3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
USP50Q70EL3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
USP50Q70EL3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
USP50Q70EL3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
USP50Q70EL3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC24.21■■□□□ 1.47
USP50Q70EL3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC24.21■■□□□ 1.47
USP50Q70EL3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC24.21■■□□□ 1.47
USP50Q70EL3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC24.21■■□□□ 1.47
USP50Q70EL3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC24.21■■□□□ 1.47
USP50Q70EL3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC24.21■■□□□ 1.47
USP50Q70EL3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms