Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC141Q6ZP82 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC141Q6ZP82 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC30.68■■■□□ 2.5
CCDC141Q6ZP82 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC141Q6ZP82 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC141Q6ZP82 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
CCDC141Q6ZP82 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC141Q6ZP82 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC141Q6ZP82 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC141Q6ZP82 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
CCDC141Q6ZP82 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC141Q6ZP82 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC30.68■■■□□ 2.5
CCDC141Q6ZP82 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC30.68■■■□□ 2.5
CCDC141Q6ZP82 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC141Q6ZP82 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC141Q6ZP82 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
CCDC141Q6ZP82 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC141Q6ZP82 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
CCDC141Q6ZP82 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC30.67■■■□□ 2.5
CCDC141Q6ZP82 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC30.67■■■□□ 2.5
CCDC141Q6ZP82 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC141Q6ZP82 TUB-203ENST00000534099 1759 ntTSL 2 BASIC30.67■■■□□ 2.5
CCDC141Q6ZP82 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC30.67■■■□□ 2.5
CCDC141Q6ZP82 AC011484.1-201ENST00000377652 1995 ntBASIC30.66■■■□□ 2.5
CCDC141Q6ZP82 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC141Q6ZP82 AC023632.3-201ENST00000521633 145 ntBASIC30.66■■■□□ 2.5
CCDC141Q6ZP82 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC30.66■■■□□ 2.5
CCDC141Q6ZP82 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC30.66■■■□□ 2.5
CCDC141Q6ZP82 AL121829.2-201ENST00000620908 328 ntBASIC30.66■■■□□ 2.5
CCDC141Q6ZP82 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC141Q6ZP82 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC141Q6ZP82 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC141Q6ZP82 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC141Q6ZP82 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC30.65■■■□□ 2.5
CCDC141Q6ZP82 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
CCDC141Q6ZP82 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC141Q6ZP82 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC141Q6ZP82 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
CCDC141Q6ZP82 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC141Q6ZP82 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC30.65■■■□□ 2.5
CCDC141Q6ZP82 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC30.65■■■□□ 2.5
CCDC141Q6ZP82 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
CCDC141Q6ZP82 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC141Q6ZP82 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC141Q6ZP82 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC30.64■■■□□ 2.5
CCDC141Q6ZP82 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC30.64■■■□□ 2.5
CCDC141Q6ZP82 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.5
CCDC141Q6ZP82 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC30.64■■■□□ 2.5
CCDC141Q6ZP82 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC141Q6ZP82 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC141Q6ZP82 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC30.64■■■□□ 2.49
CCDC141Q6ZP82 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.49
CCDC141Q6ZP82 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC141Q6ZP82 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC141Q6ZP82 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC141Q6ZP82 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC141Q6ZP82 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC30.63■■■□□ 2.49
CCDC141Q6ZP82 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
CCDC141Q6ZP82 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC141Q6ZP82 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC30.63■■■□□ 2.49
CCDC141Q6ZP82 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC141Q6ZP82 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC141Q6ZP82 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC141Q6ZP82 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC141Q6ZP82 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
CCDC141Q6ZP82 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC30.63■■■□□ 2.49
CCDC141Q6ZP82 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC141Q6ZP82 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC30.63■■■□□ 2.49
CCDC141Q6ZP82 AC097493.4-201ENST00000641197 219 ntBASIC30.63■■■□□ 2.49
CCDC141Q6ZP82 STK25-205ENST00000405883 1904 ntTSL 2 BASIC30.62■■■□□ 2.49
CCDC141Q6ZP82 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
CCDC141Q6ZP82 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC141Q6ZP82 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC141Q6ZP82 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC141Q6ZP82 AC124283.5-201ENST00000624661 1809 ntBASIC30.62■■■□□ 2.49
CCDC141Q6ZP82 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC30.62■■■□□ 2.49
CCDC141Q6ZP82 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC30.62■■■□□ 2.49
CCDC141Q6ZP82 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC141Q6ZP82 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC30.62■■■□□ 2.49
CCDC141Q6ZP82 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC30.62■■■□□ 2.49
CCDC141Q6ZP82 AC010331.1-201ENST00000611423 582 ntBASIC30.62■■■□□ 2.49
CCDC141Q6ZP82 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC141Q6ZP82 DYM-203ENST00000442713 2147 ntTSL 2 BASIC30.62■■■□□ 2.49
CCDC141Q6ZP82 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
CCDC141Q6ZP82 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC141Q6ZP82 KRT8P36-201ENST00000489121 1440 ntBASIC30.61■■■□□ 2.49
CCDC141Q6ZP82 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC30.61■■■□□ 2.49
CCDC141Q6ZP82 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC30.61■■■□□ 2.49
CCDC141Q6ZP82 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC30.61■■■□□ 2.49
CCDC141Q6ZP82 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC30.61■■■□□ 2.49
CCDC141Q6ZP82 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC141Q6ZP82 MIR2861-201ENST00000636310 90 ntBASIC30.61■■■□□ 2.49
CCDC141Q6ZP82 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
CCDC141Q6ZP82 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC30.6■■■□□ 2.49
CCDC141Q6ZP82 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CCDC141Q6ZP82 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
CCDC141Q6ZP82 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CCDC141Q6ZP82 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CCDC141Q6ZP82 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CCDC141Q6ZP82 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms