Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.01■■□□□ 1.27
SHC4Q6S5L8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
SHC4Q6S5L8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SHC4Q6S5L8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SHC4Q6S5L8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.01■■□□□ 1.27
SHC4Q6S5L8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.01■■□□□ 1.27
SHC4Q6S5L8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.01■■□□□ 1.27
SHC4Q6S5L8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.01■■□□□ 1.27
SHC4Q6S5L8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SHC4Q6S5L8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SHC4Q6S5L8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.01■■□□□ 1.27
SHC4Q6S5L8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SHC4Q6S5L8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
SHC4Q6S5L8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23■■□□□ 1.27
SHC4Q6S5L8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
SHC4Q6S5L8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23■■□□□ 1.27
SHC4Q6S5L8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
SHC4Q6S5L8 TERF1P5-201ENST00000477545 1207 ntBASIC23■■□□□ 1.27
SHC4Q6S5L8 DBI-210ENST00000542275 757 ntTSL 5 BASIC23■■□□□ 1.27
SHC4Q6S5L8 AC010536.3-201ENST00000620306 533 ntBASIC23■■□□□ 1.27
SHC4Q6S5L8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
SHC4Q6S5L8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SHC4Q6S5L8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
SHC4Q6S5L8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23■■□□□ 1.27
SHC4Q6S5L8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23■■□□□ 1.27
SHC4Q6S5L8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SHC4Q6S5L8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SHC4Q6S5L8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SHC4Q6S5L8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SHC4Q6S5L8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.99■■□□□ 1.27
SHC4Q6S5L8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SHC4Q6S5L8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.99■■□□□ 1.27
SHC4Q6S5L8 CDV3P1-201ENST00000471403 739 ntBASIC22.99■■□□□ 1.27
SHC4Q6S5L8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SHC4Q6S5L8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SHC4Q6S5L8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.99■■□□□ 1.27
SHC4Q6S5L8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SHC4Q6S5L8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SHC4Q6S5L8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SHC4Q6S5L8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SHC4Q6S5L8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.99■■□□□ 1.27
SHC4Q6S5L8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.99■■□□□ 1.27
SHC4Q6S5L8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
SHC4Q6S5L8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.99■■□□□ 1.27
SHC4Q6S5L8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SHC4Q6S5L8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHC4Q6S5L8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHC4Q6S5L8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SHC4Q6S5L8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHC4Q6S5L8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.98■■□□□ 1.27
SHC4Q6S5L8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHC4Q6S5L8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
SHC4Q6S5L8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.98■■□□□ 1.27
SHC4Q6S5L8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHC4Q6S5L8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.98■■□□□ 1.27
SHC4Q6S5L8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SHC4Q6S5L8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.98■■□□□ 1.27
SHC4Q6S5L8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SHC4Q6S5L8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHC4Q6S5L8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
SHC4Q6S5L8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHC4Q6S5L8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHC4Q6S5L8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHC4Q6S5L8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHC4Q6S5L8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHC4Q6S5L8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
SHC4Q6S5L8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
SHC4Q6S5L8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHC4Q6S5L8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHC4Q6S5L8 KRT18P5-201ENST00000436075 1291 ntBASIC22.97■■□□□ 1.27
SHC4Q6S5L8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.97■■□□□ 1.27
SHC4Q6S5L8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.97■■□□□ 1.27
SHC4Q6S5L8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
SHC4Q6S5L8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.97■■□□□ 1.27
SHC4Q6S5L8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
SHC4Q6S5L8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.97■■□□□ 1.27
SHC4Q6S5L8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.97■■□□□ 1.27
SHC4Q6S5L8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SHC4Q6S5L8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHC4Q6S5L8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHC4Q6S5L8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.96■■□□□ 1.27
SHC4Q6S5L8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.96■■□□□ 1.27
SHC4Q6S5L8 FAM21FP-204ENST00000608637 956 ntBASIC22.96■■□□□ 1.27
SHC4Q6S5L8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
SHC4Q6S5L8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.96■■□□□ 1.27
SHC4Q6S5L8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SHC4Q6S5L8 DPP3P2-201ENST00000416030 1696 ntBASIC22.96■■□□□ 1.27
SHC4Q6S5L8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
SHC4Q6S5L8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.96■■□□□ 1.27
SHC4Q6S5L8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SHC4Q6S5L8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SHC4Q6S5L8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SHC4Q6S5L8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
SHC4Q6S5L8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SHC4Q6S5L8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.95■■□□□ 1.26
SHC4Q6S5L8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.95■■□□□ 1.26
SHC4Q6S5L8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
SHC4Q6S5L8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.95■■□□□ 1.26
SHC4Q6S5L8 AC026271.2-201ENST00000428091 497 ntBASIC22.95■■□□□ 1.26
SHC4Q6S5L8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms