Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LCN1P1Q5VSP4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LCN1P1Q5VSP4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LCN1P1Q5VSP4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.36■□□□□ 0.53
LCN1P1Q5VSP4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LCN1P1Q5VSP4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LCN1P1Q5VSP4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LCN1P1Q5VSP4 AP001330.3-201ENST00000520123 633 ntBASIC18.36■□□□□ 0.53
LCN1P1Q5VSP4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.36■□□□□ 0.53
LCN1P1Q5VSP4 AL162377.1-201ENST00000618844 1793 ntBASIC18.36■□□□□ 0.53
LCN1P1Q5VSP4 AC008406.3-201ENST00000620001 1374 ntBASIC18.36■□□□□ 0.53
LCN1P1Q5VSP4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LCN1P1Q5VSP4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LCN1P1Q5VSP4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LCN1P1Q5VSP4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LCN1P1Q5VSP4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 AL512408.1-201ENST00000569378 2000 ntBASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 AC092720.2-201ENST00000602388 1665 ntBASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 RASA4CP-201ENST00000424092 1398 ntBASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 AC096631.2-201ENST00000436136 790 ntBASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 AC018445.3-201ENST00000624177 1945 ntBASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCN1P1Q5VSP4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 SMG8-203ENST00000578922 2178 ntBASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 AC012414.1-201ENST00000556676 535 ntBASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 AC106739.1-201ENST00000617035 715 ntBASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LCN1P1Q5VSP4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.33■□□□□ 0.53
LCN1P1Q5VSP4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LCN1P1Q5VSP4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
LCN1P1Q5VSP4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LCN1P1Q5VSP4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LCN1P1Q5VSP4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LCN1P1Q5VSP4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LCN1P1Q5VSP4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
LCN1P1Q5VSP4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.33■□□□□ 0.52
LCN1P1Q5VSP4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.33■□□□□ 0.52
LCN1P1Q5VSP4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LCN1P1Q5VSP4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LCN1P1Q5VSP4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.33■□□□□ 0.52
LCN1P1Q5VSP4 AC245052.3-201ENST00000450182 901 ntBASIC18.33■□□□□ 0.52
LCN1P1Q5VSP4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LCN1P1Q5VSP4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.33■□□□□ 0.52
LCN1P1Q5VSP4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.33■□□□□ 0.52
LCN1P1Q5VSP4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.33■□□□□ 0.52
LCN1P1Q5VSP4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.33■□□□□ 0.52
LCN1P1Q5VSP4 AL355001.2-201ENST00000620617 1191 ntBASIC18.33■□□□□ 0.52
LCN1P1Q5VSP4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.33■□□□□ 0.52
LCN1P1Q5VSP4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LCN1P1Q5VSP4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LCN1P1Q5VSP4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LCN1P1Q5VSP4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LCN1P1Q5VSP4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LCN1P1Q5VSP4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
LCN1P1Q5VSP4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LCN1P1Q5VSP4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 BX323043.1-201ENST00000641006 1765 ntBASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms