Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.2■□□□□ 0.66
LRIF1Q5T3J3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIF1Q5T3J3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIF1Q5T3J3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIF1Q5T3J3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.2■□□□□ 0.66
LRIF1Q5T3J3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.2■□□□□ 0.66
LRIF1Q5T3J3 KRT18P20-201ENST00000548986 1279 ntBASIC19.2■□□□□ 0.66
LRIF1Q5T3J3 CCDC92B-201ENST00000575506 885 ntBASIC19.2■□□□□ 0.66
LRIF1Q5T3J3 AP001160.3-201ENST00000601484 763 ntBASIC19.2■□□□□ 0.66
LRIF1Q5T3J3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRIF1Q5T3J3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
LRIF1Q5T3J3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LRIF1Q5T3J3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.2■□□□□ 0.66
LRIF1Q5T3J3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIF1Q5T3J3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIF1Q5T3J3 LINC02228-203ENST00000641970 1355 ntBASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 KRT8P36-201ENST00000489121 1440 ntBASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 AC091799.1-201ENST00000422823 811 ntBASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 AC125437.2-201ENST00000625180 2167 ntBASIC19.19■□□□□ 0.66
LRIF1Q5T3J3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.18■□□□□ 0.66
LRIF1Q5T3J3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIF1Q5T3J3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRIF1Q5T3J3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIF1Q5T3J3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LRIF1Q5T3J3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LRIF1Q5T3J3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIF1Q5T3J3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIF1Q5T3J3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRIF1Q5T3J3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRIF1Q5T3J3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LRIF1Q5T3J3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LRIF1Q5T3J3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIF1Q5T3J3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIF1Q5T3J3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LRIF1Q5T3J3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LRIF1Q5T3J3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.18■□□□□ 0.66
LRIF1Q5T3J3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIF1Q5T3J3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LRIF1Q5T3J3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIF1Q5T3J3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LRIF1Q5T3J3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIF1Q5T3J3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIF1Q5T3J3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIF1Q5T3J3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.17■□□□□ 0.66
LRIF1Q5T3J3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIF1Q5T3J3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRIF1Q5T3J3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.17■□□□□ 0.66
LRIF1Q5T3J3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.17■□□□□ 0.66
LRIF1Q5T3J3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.17■□□□□ 0.66
LRIF1Q5T3J3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.17■□□□□ 0.66
LRIF1Q5T3J3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIF1Q5T3J3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIF1Q5T3J3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIF1Q5T3J3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIF1Q5T3J3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIF1Q5T3J3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIF1Q5T3J3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIF1Q5T3J3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 SLC7A5P1-201ENST00000568957 537 ntBASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.16■□□□□ 0.66
LRIF1Q5T3J3 RBM17P2-201ENST00000616397 1405 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms