Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.63■■□□□ 1.05
VARS2Q5ST30 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.63■■□□□ 1.05
VARS2Q5ST30 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VARS2Q5ST30 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.63■■□□□ 1.05
VARS2Q5ST30 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VARS2Q5ST30 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VARS2Q5ST30 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VARS2Q5ST30 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.63■■□□□ 1.05
VARS2Q5ST30 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.63■■□□□ 1.05
VARS2Q5ST30 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VARS2Q5ST30 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
VARS2Q5ST30 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
VARS2Q5ST30 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VARS2Q5ST30 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VARS2Q5ST30 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.62■■□□□ 1.05
VARS2Q5ST30 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VARS2Q5ST30 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
VARS2Q5ST30 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VARS2Q5ST30 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VARS2Q5ST30 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VARS2Q5ST30 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.62■■□□□ 1.05
VARS2Q5ST30 AC006557.6-201ENST00000623071 864 ntBASIC21.62■■□□□ 1.05
VARS2Q5ST30 MIR2861-201ENST00000636310 90 ntBASIC21.62■■□□□ 1.05
VARS2Q5ST30 AC121338.2-201ENST00000622535 1744 ntBASIC21.62■■□□□ 1.05
VARS2Q5ST30 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
VARS2Q5ST30 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VARS2Q5ST30 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VARS2Q5ST30 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
VARS2Q5ST30 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VARS2Q5ST30 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
VARS2Q5ST30 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VARS2Q5ST30 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VARS2Q5ST30 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VARS2Q5ST30 UBE2SP1-201ENST00000450587 669 ntBASIC21.61■■□□□ 1.05
VARS2Q5ST30 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
VARS2Q5ST30 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.61■■□□□ 1.05
VARS2Q5ST30 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.61■■□□□ 1.05
VARS2Q5ST30 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VARS2Q5ST30 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.61■■□□□ 1.05
VARS2Q5ST30 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VARS2Q5ST30 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.61■■□□□ 1.05
VARS2Q5ST30 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
VARS2Q5ST30 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
VARS2Q5ST30 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VARS2Q5ST30 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VARS2Q5ST30 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
VARS2Q5ST30 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
VARS2Q5ST30 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VARS2Q5ST30 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VARS2Q5ST30 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VARS2Q5ST30 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VARS2Q5ST30 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
VARS2Q5ST30 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
VARS2Q5ST30 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
VARS2Q5ST30 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
VARS2Q5ST30 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VARS2Q5ST30 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
VARS2Q5ST30 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VARS2Q5ST30 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VARS2Q5ST30 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VARS2Q5ST30 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VARS2Q5ST30 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
VARS2Q5ST30 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.6■■□□□ 1.05
VARS2Q5ST30 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
VARS2Q5ST30 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VARS2Q5ST30 FEM1AP4-201ENST00000443167 1987 ntBASIC21.6■■□□□ 1.05
VARS2Q5ST30 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
VARS2Q5ST30 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VARS2Q5ST30 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
VARS2Q5ST30 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
VARS2Q5ST30 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
VARS2Q5ST30 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.6■■□□□ 1.05
VARS2Q5ST30 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.6■■□□□ 1.05
VARS2Q5ST30 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.6■■□□□ 1.05
VARS2Q5ST30 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.6■■□□□ 1.05
VARS2Q5ST30 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VARS2Q5ST30 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.6■■□□□ 1.05
VARS2Q5ST30 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VARS2Q5ST30 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.6■■□□□ 1.05
VARS2Q5ST30 FAM197Y4-202ENST00000622692 608 ntBASIC21.6■■□□□ 1.05
VARS2Q5ST30 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.6■■□□□ 1.05
VARS2Q5ST30 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
VARS2Q5ST30 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
VARS2Q5ST30 KRT8P36-201ENST00000489121 1440 ntBASIC21.6■■□□□ 1.05
VARS2Q5ST30 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VARS2Q5ST30 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VARS2Q5ST30 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VARS2Q5ST30 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
VARS2Q5ST30 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.6■■□□□ 1.05
VARS2Q5ST30 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.6■■□□□ 1.05
VARS2Q5ST30 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
VARS2Q5ST30 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VARS2Q5ST30 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VARS2Q5ST30 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
VARS2Q5ST30 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
VARS2Q5ST30 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VARS2Q5ST30 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VARS2Q5ST30 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.59■■□□□ 1.05
VARS2Q5ST30 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VARS2Q5ST30 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms