Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RFX4Q33E94 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RFX4Q33E94 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.89■□□□□ 0.62
RFX4Q33E94 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFX4Q33E94 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFX4Q33E94 AC005224.4-201ENST00000583262 1652 ntBASIC18.89■□□□□ 0.61
RFX4Q33E94 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFX4Q33E94 AC098818.2-201ENST00000564925 2320 ntBASIC18.89■□□□□ 0.61
RFX4Q33E94 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RFX4Q33E94 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.89■□□□□ 0.61
RFX4Q33E94 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RFX4Q33E94 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFX4Q33E94 AC099791.1-201ENST00000416440 715 ntBASIC18.89■□□□□ 0.61
RFX4Q33E94 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RFX4Q33E94 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.89■□□□□ 0.61
RFX4Q33E94 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.89■□□□□ 0.61
RFX4Q33E94 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.89■□□□□ 0.61
RFX4Q33E94 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RFX4Q33E94 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFX4Q33E94 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.89■□□□□ 0.61
RFX4Q33E94 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
RFX4Q33E94 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RFX4Q33E94 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFX4Q33E94 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RFX4Q33E94 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFX4Q33E94 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RFX4Q33E94 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX4Q33E94 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.88■□□□□ 0.61
RFX4Q33E94 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RFX4Q33E94 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFX4Q33E94 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RFX4Q33E94 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX4Q33E94 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.88■□□□□ 0.61
RFX4Q33E94 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.88■□□□□ 0.61
RFX4Q33E94 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.88■□□□□ 0.61
RFX4Q33E94 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX4Q33E94 TSPY26P-201ENST00000476365 1326 ntBASIC18.88■□□□□ 0.61
RFX4Q33E94 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFX4Q33E94 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFX4Q33E94 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX4Q33E94 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.88■□□□□ 0.61
RFX4Q33E94 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.88■□□□□ 0.61
RFX4Q33E94 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX4Q33E94 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX4Q33E94 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX4Q33E94 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.88■□□□□ 0.61
RFX4Q33E94 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
RFX4Q33E94 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RFX4Q33E94 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX4Q33E94 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX4Q33E94 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX4Q33E94 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX4Q33E94 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RFX4Q33E94 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.87■□□□□ 0.61
RFX4Q33E94 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX4Q33E94 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.87■□□□□ 0.61
RFX4Q33E94 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.87■□□□□ 0.61
RFX4Q33E94 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.87■□□□□ 0.61
RFX4Q33E94 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.87■□□□□ 0.61
RFX4Q33E94 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.87■□□□□ 0.61
RFX4Q33E94 AC027682.1-201ENST00000562846 899 ntBASIC18.87■□□□□ 0.61
RFX4Q33E94 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.87■□□□□ 0.61
RFX4Q33E94 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RFX4Q33E94 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.86■□□□□ 0.61
RFX4Q33E94 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX4Q33E94 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RFX4Q33E94 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFX4Q33E94 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX4Q33E94 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX4Q33E94 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RFX4Q33E94 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX4Q33E94 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX4Q33E94 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RFX4Q33E94 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFX4Q33E94 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX4Q33E94 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.86■□□□□ 0.61
RFX4Q33E94 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RFX4Q33E94 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX4Q33E94 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX4Q33E94 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.86■□□□□ 0.61
RFX4Q33E94 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.86■□□□□ 0.61
RFX4Q33E94 PBX2P1-201ENST00000493219 1291 ntBASIC18.86■□□□□ 0.61
RFX4Q33E94 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.86■□□□□ 0.61
RFX4Q33E94 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.86■□□□□ 0.61
RFX4Q33E94 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RFX4Q33E94 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.86■□□□□ 0.61
RFX4Q33E94 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX4Q33E94 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX4Q33E94 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RFX4Q33E94 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.85■□□□□ 0.61
RFX4Q33E94 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX4Q33E94 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
RFX4Q33E94 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.85■□□□□ 0.61
RFX4Q33E94 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX4Q33E94 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX4Q33E94 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.85■□□□□ 0.61
RFX4Q33E94 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.85■□□□□ 0.61
RFX4Q33E94 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
RFX4Q33E94 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.85■□□□□ 0.61
RFX4Q33E94 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms