Protein–RNA interactions for Protein: Q00723

PRP38, Pre-mRNA-splicing factor 38, yeastyeast

Predicted RBP Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP38Q00723 COX13YGL191W 390 nt1.93□□□□□ -2.1
PRP38Q00723 YHR130CYHR130C 336 nt1.93□□□□□ -2.1
PRP38Q00723 TIM8YJR135W-A 264 nt1.93□□□□□ -2.1
PRP38Q00723 YLR458WYLR458W 381 nt1.93□□□□□ -2.1
PRP38Q00723 SIP18YMR175W 240 nt1.93□□□□□ -2.1
PRP38Q00723 YOR105WYOR105W 327 nt1.93□□□□□ -2.1
PRP38Q00723 YBR277CYBR277C 402 nt1.93□□□□□ -2.1
PRP38Q00723 SHE9YDR393W 1371 nt1.93□□□□□ -2.1
PRP38Q00723 YHR214C-CYHR214C-C 1437 nt1.92□□□□□ -2.1
PRP38Q00723 BNA7YDR428C 786 nt1.92□□□□□ -2.1
PRP38Q00723 YER084W-AYER084W-A 513 nt1.92□□□□□ -2.1
PRP38Q00723 RPL40AYIL148W 387 nt1.92□□□□□ -2.1
PRP38Q00723 YJR079WYJR079W 330 nt1.92□□□□□ -2.1
PRP38Q00723 YJR140W-AYJR140W-A 150 nt1.92□□□□□ -2.1
PRP38Q00723 YLR031WYLR031W 561 nt1.92□□□□□ -2.1
PRP38Q00723 YLR154W-AYLR154W-A 186 nt1.92□□□□□ -2.1
PRP38Q00723 YOR032W-AYOR032W-A 201 nt1.92□□□□□ -2.1
PRP38Q00723 CBF2YGR140W 2871 nt1.92□□□□□ -2.1
PRP38Q00723 MSL5YLR116W 1431 nt1.91□□□□□ -2.1
PRP38Q00723 SET2YJL168C 2202 nt1.91□□□□□ -2.1
PRP38Q00723 UBP11YKR098C 2154 nt1.91□□□□□ -2.1
PRP38Q00723 RVS161YCR009C 798 nt1.91□□□□□ -2.1
PRP38Q00723 YEL018C-AYEL018C-A 534 nt1.91□□□□□ -2.1
PRP38Q00723 CAJ1YER048C 1176 nt1.91□□□□□ -2.1
PRP38Q00723 BIG1YHR101C 1008 nt1.91□□□□□ -2.1
PRP38Q00723 RMP1YLR145W 606 nt1.91□□□□□ -2.1
PRP38Q00723 MPH1YIR002C 2982 nt1.91□□□□□ -2.1
PRP38Q00723 SPE1YKL184W 1401 nt1.91□□□□□ -2.1
PRP38Q00723 YOR192C-AYOR192C-A 1317 nt1.91□□□□□ -2.1
PRP38Q00723 PRK1YIL095W 2433 nt1.9□□□□□ -2.1
PRP38Q00723 ATG11YPR049C 3537 nt1.9□□□□□ -2.1
PRP38Q00723 YJL070CYJL070C 2667 nt1.9□□□□□ -2.1
PRP38Q00723 YCR001WYCR001W 315 nt1.9□□□□□ -2.11
PRP38Q00723 YDR194W-AYDR194W-A 153 nt1.9□□□□□ -2.11
PRP38Q00723 YGL014C-AYGL014C-A 162 nt1.9□□□□□ -2.11
PRP38Q00723 RPI1YIL119C 1224 nt1.9□□□□□ -2.11
PRP38Q00723 YKL111CYKL111C 336 nt1.9□□□□□ -2.11
PRP38Q00723 SHE2YKL130C 741 nt1.9□□□□□ -2.11
PRP38Q00723 YLR379WYLR379W 375 nt1.9□□□□□ -2.11
PRP38Q00723 SPC29YPL124W 762 nt1.9□□□□□ -2.11
PRP38Q00723 REV1YOR346W 2958 nt1.9□□□□□ -2.11
PRP38Q00723 YMR045CYMR045C 5268 nt1.89□□□□□ -2.11
PRP38Q00723 ASM4YDL088C 1587 nt1.89□□□□□ -2.11
PRP38Q00723 YFR056CYFR056C 369 nt1.89□□□□□ -2.11
PRP38Q00723 RPC10YHR143W-A 213 nt1.89□□□□□ -2.11
PRP38Q00723 KAP123YER110C 3342 nt1.89□□□□□ -2.11
PRP38Q00723 PTC5YOR090C 1719 nt1.88□□□□□ -2.11
PRP38Q00723 YOR093CYOR093C 4947 nt1.88□□□□□ -2.11
PRP38Q00723 NUP82YJL061W 2142 nt1.88□□□□□ -2.11
PRP38Q00723 UBR1YGR184C 5853 nt1.88□□□□□ -2.11
PRP38Q00723 UBR2YLR024C 5619 nt1.88□□□□□ -2.11
PRP38Q00723 YDL025W-AYDL025W-A 105 nt1.88□□□□□ -2.11
PRP38Q00723 BI2Q0110 1272 nt1.88□□□□□ -2.11
PRP38Q00723 YHR071C-AYHR071C-A 321 nt1.88□□□□□ -2.11
PRP38Q00723 YLR171WYLR171W 390 nt1.88□□□□□ -2.11
PRP38Q00723 SYM1YLR251W 594 nt1.88□□□□□ -2.11
PRP38Q00723 TOM22YNL131W 459 nt1.88□□□□□ -2.11
PRP38Q00723 LSM7YNL147W 348 nt1.88□□□□□ -2.11
PRP38Q00723 PEX8YGR077C 1770 nt1.87□□□□□ -2.11
PRP38Q00723 NCL1YBL024W 2055 nt1.87□□□□□ -2.11
PRP38Q00723 YDL068WYDL068W 330 nt1.87□□□□□ -2.11
PRP38Q00723 FMP16YDR070C 282 nt1.87□□□□□ -2.11
PRP38Q00723 DAD4YDR320C-A 219 nt1.87□□□□□ -2.11
PRP38Q00723 NCE101YJL205C 162 nt1.87□□□□□ -2.11
PRP38Q00723 MUD2YKL074C 1584 nt1.87□□□□□ -2.11
PRP38Q00723 AIM29YKR074W 468 nt1.87□□□□□ -2.11
PRP38Q00723 IRC19YLL033W 693 nt1.87□□□□□ -2.11
PRP38Q00723 YLR255CYLR255C 354 nt1.87□□□□□ -2.11
PRP38Q00723 YBR076C-AYBR076C-A 267 nt1.87□□□□□ -2.11
PRP38Q00723 USO1YDL058W 5373 nt1.87□□□□□ -2.11
PRP38Q00723 FAB1YFR019W 6837 nt1.86□□□□□ -2.11
PRP38Q00723 YML108WYML108W 318 nt1.86□□□□□ -2.11
PRP38Q00723 SEN15YMR059W 387 nt1.86□□□□□ -2.11
PRP38Q00723 snR41snR41 95 nt1.86□□□□□ -2.11
PRP38Q00723 YBR012W-AYBR012W-A 1323 nt1.86□□□□□ -2.11
PRP38Q00723 YOR142W-AYOR142W-A 1323 nt1.86□□□□□ -2.11
PRP38Q00723 YPR158W-AYPR158W-A 1323 nt1.86□□□□□ -2.11
PRP38Q00723 RRP6YOR001W 2202 nt1.86□□□□□ -2.11
PRP38Q00723 MZM1YDR493W 372 nt1.85□□□□□ -2.11
PRP38Q00723 tT(UGU)Q1tT(UGU)Q1 76 nt1.85□□□□□ -2.11
PRP38Q00723 YJL007CYJL007C 315 nt1.85□□□□□ -2.11
PRP38Q00723 LCL2YLR104W 396 nt1.85□□□□□ -2.11
PRP38Q00723 YLR269CYLR269C 351 nt1.85□□□□□ -2.11
PRP38Q00723 SLM6YBR266C 453 nt1.85□□□□□ -2.11
PRP38Q00723 RNH70YGR276C 1662 nt1.85□□□□□ -2.11
PRP38Q00723 YJL016WYJL016W 1686 nt1.85□□□□□ -2.11
PRP38Q00723 NAN1YPL126W 2691 nt1.85□□□□□ -2.11
PRP38Q00723 MYO2YOR326W 4725 nt1.85□□□□□ -2.11
PRP38Q00723 GIP3YPL137C 3831 nt1.84□□□□□ -2.11
PRP38Q00723 YER188C-AYER188C-A 300 nt1.84□□□□□ -2.11
PRP38Q00723 ECL1YGR146C 636 nt1.84□□□□□ -2.11
PRP38Q00723 YJR157WYJR157W 363 nt1.84□□□□□ -2.11
PRP38Q00723 YNL010WYNL010W 726 nt1.84□□□□□ -2.11
PRP38Q00723 YOR248WYOR248W 303 nt1.84□□□□□ -2.11
PRP38Q00723 YPL205CYPL205C 345 nt1.84□□□□□ -2.11
PRP38Q00723 IPT1YDR072C 1584 nt1.84□□□□□ -2.12
PRP38Q00723 ATG9YDL149W 2994 nt1.83□□□□□ -2.12
PRP38Q00723 BFA1YJR053W 1725 nt1.83□□□□□ -2.12
PRP38Q00723 NOP10YHR072W-A 177 nt1.83□□□□□ -2.12
PRP38Q00723 COX7YMR256C 183 nt1.83□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 19 ms