Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPS4XP62701 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPS4XP62701 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPS4XP62701 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.4■□□□□ 0.54
RPS4XP62701 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RPS4XP62701 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RPS4XP62701 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RPS4XP62701 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPS4XP62701 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPS4XP62701 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPS4XP62701 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RPS4XP62701 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.39■□□□□ 0.53
RPS4XP62701 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPS4XP62701 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
RPS4XP62701 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.39■□□□□ 0.53
RPS4XP62701 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
RPS4XP62701 NCF1B-203ENST00000435988 1254 ntBASIC18.39■□□□□ 0.53
RPS4XP62701 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RPS4XP62701 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPS4XP62701 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.39■□□□□ 0.53
RPS4XP62701 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.39■□□□□ 0.53
RPS4XP62701 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPS4XP62701 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPS4XP62701 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.39■□□□□ 0.53
RPS4XP62701 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.39■□□□□ 0.53
RPS4XP62701 UBE2DNL-204ENST00000602536 740 ntBASIC18.39■□□□□ 0.53
RPS4XP62701 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
RPS4XP62701 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
RPS4XP62701 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.39■□□□□ 0.53
RPS4XP62701 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.39■□□□□ 0.53
RPS4XP62701 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPS4XP62701 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPS4XP62701 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPS4XP62701 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPS4XP62701 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
RPS4XP62701 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.38■□□□□ 0.53
RPS4XP62701 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RPS4XP62701 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.38■□□□□ 0.53
RPS4XP62701 GPX1P1-201ENST00000388829 606 ntBASIC18.38■□□□□ 0.53
RPS4XP62701 AC007322.3-201ENST00000426526 701 ntBASIC18.38■□□□□ 0.53
RPS4XP62701 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.38■□□□□ 0.53
RPS4XP62701 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
RPS4XP62701 AC099778.1-201ENST00000568593 1911 ntBASIC18.38■□□□□ 0.53
RPS4XP62701 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPS4XP62701 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPS4XP62701 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RPS4XP62701 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RPS4XP62701 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPS4XP62701 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.38■□□□□ 0.53
RPS4XP62701 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPS4XP62701 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RPS4XP62701 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS4XP62701 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.37■□□□□ 0.53
RPS4XP62701 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.37■□□□□ 0.53
RPS4XP62701 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS4XP62701 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPS4XP62701 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.37■□□□□ 0.53
RPS4XP62701 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.37■□□□□ 0.53
RPS4XP62701 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.37■□□□□ 0.53
RPS4XP62701 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
RPS4XP62701 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS4XP62701 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS4XP62701 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS4XP62701 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS4XP62701 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS4XP62701 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS4XP62701 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RPS4XP62701 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPS4XP62701 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS4XP62701 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS4XP62701 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.36■□□□□ 0.53
RPS4XP62701 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4XP62701 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4XP62701 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4XP62701 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4XP62701 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4XP62701 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4XP62701 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RPS4XP62701 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4XP62701 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4XP62701 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4XP62701 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.36■□□□□ 0.53
RPS4XP62701 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.36■□□□□ 0.53
RPS4XP62701 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4XP62701 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.36■□□□□ 0.53
RPS4XP62701 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RPS4XP62701 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.36■□□□□ 0.53
RPS4XP62701 MFSD11-216ENST00000590393 1141 ntBASIC18.36■□□□□ 0.53
RPS4XP62701 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RPS4XP62701 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RPS4XP62701 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.36■□□□□ 0.53
RPS4XP62701 AC231657.2-201ENST00000624556 255 ntBASIC18.36■□□□□ 0.53
RPS4XP62701 MYCNOS-205ENST00000641950 531 ntBASIC18.36■□□□□ 0.53
RPS4XP62701 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RPS4XP62701 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4XP62701 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4XP62701 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4XP62701 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.35■□□□□ 0.53
RPS4XP62701 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.35■□□□□ 0.53
RPS4XP62701 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms