Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
AP1S1P61966 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP1S1P61966 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP1S1P61966 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.54■□□□□ 0.88
AP1S1P61966 AL121603.2-201ENST00000557373 2117 ntBASIC20.54■□□□□ 0.88
AP1S1P61966 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
AP1S1P61966 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
AP1S1P61966 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S1P61966 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S1P61966 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
AP1S1P61966 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.53■□□□□ 0.88
AP1S1P61966 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S1P61966 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.53■□□□□ 0.88
AP1S1P61966 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S1P61966 C2orf69P4-201ENST00000565394 541 ntBASIC20.53■□□□□ 0.88
AP1S1P61966 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S1P61966 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S1P61966 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S1P61966 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP1S1P61966 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
AP1S1P61966 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP1S1P61966 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
AP1S1P61966 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
AP1S1P61966 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.52■□□□□ 0.88
AP1S1P61966 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.52■□□□□ 0.88
AP1S1P61966 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
AP1S1P61966 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
AP1S1P61966 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
AP1S1P61966 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
AP1S1P61966 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.51■□□□□ 0.87
AP1S1P61966 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP1S1P61966 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.51■□□□□ 0.87
AP1S1P61966 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP1S1P61966 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
AP1S1P61966 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP1S1P61966 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.51■□□□□ 0.87
AP1S1P61966 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
AP1S1P61966 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.51■□□□□ 0.87
AP1S1P61966 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.51■□□□□ 0.87
AP1S1P61966 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.51■□□□□ 0.87
AP1S1P61966 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.51■□□□□ 0.87
AP1S1P61966 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.51■□□□□ 0.87
AP1S1P61966 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
AP1S1P61966 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.51■□□□□ 0.87
AP1S1P61966 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP1S1P61966 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP1S1P61966 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP1S1P61966 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP1S1P61966 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
AP1S1P61966 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.51■□□□□ 0.87
AP1S1P61966 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP1S1P61966 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
AP1S1P61966 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP1S1P61966 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP1S1P61966 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP1S1P61966 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.5■□□□□ 0.87
AP1S1P61966 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.5■□□□□ 0.87
AP1S1P61966 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
AP1S1P61966 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
AP1S1P61966 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.5■□□□□ 0.87
AP1S1P61966 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP1S1P61966 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
AP1S1P61966 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP1S1P61966 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP1S1P61966 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.5■□□□□ 0.87
AP1S1P61966 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
AP1S1P61966 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP1S1P61966 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
AP1S1P61966 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP1S1P61966 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP1S1P61966 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
AP1S1P61966 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.49■□□□□ 0.87
AP1S1P61966 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
AP1S1P61966 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP1S1P61966 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.49■□□□□ 0.87
AP1S1P61966 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP1S1P61966 AC083880.1-201ENST00000608266 535 ntBASIC20.49■□□□□ 0.87
AP1S1P61966 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP1S1P61966 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
AP1S1P61966 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
AP1S1P61966 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
AP1S1P61966 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.49■□□□□ 0.87
AP1S1P61966 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.49■□□□□ 0.87
AP1S1P61966 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP1S1P61966 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.48■□□□□ 0.87
AP1S1P61966 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
AP1S1P61966 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP1S1P61966 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP1S1P61966 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.48■□□□□ 0.87
AP1S1P61966 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.48■□□□□ 0.87
AP1S1P61966 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP1S1P61966 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
AP1S1P61966 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
AP1S1P61966 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
AP1S1P61966 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.48■□□□□ 0.87
AP1S1P61966 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP1S1P61966 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP1S1P61966 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP1S1P61966 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.48■□□□□ 0.87
AP1S1P61966 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms