Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDC42P60953 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.57■□□□□ 0.56
CDC42P60953 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDC42P60953 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.57■□□□□ 0.56
CDC42P60953 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CDC42P60953 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDC42P60953 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDC42P60953 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDC42P60953 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDC42P60953 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.56■□□□□ 0.56
CDC42P60953 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDC42P60953 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDC42P60953 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDC42P60953 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CDC42P60953 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.56■□□□□ 0.56
CDC42P60953 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.56■□□□□ 0.56
CDC42P60953 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.56■□□□□ 0.56
CDC42P60953 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDC42P60953 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDC42P60953 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDC42P60953 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDC42P60953 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.56■□□□□ 0.56
CDC42P60953 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.56■□□□□ 0.56
CDC42P60953 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.56■□□□□ 0.56
CDC42P60953 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CDC42P60953 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDC42P60953 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CDC42P60953 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDC42P60953 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.56■□□□□ 0.56
CDC42P60953 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CDC42P60953 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDC42P60953 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDC42P60953 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CDC42P60953 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDC42P60953 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDC42P60953 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDC42P60953 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CDC42P60953 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDC42P60953 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CDC42P60953 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CDC42P60953 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDC42P60953 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDC42P60953 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.55■□□□□ 0.56
CDC42P60953 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.55■□□□□ 0.56
CDC42P60953 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.55■□□□□ 0.56
CDC42P60953 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.55■□□□□ 0.56
CDC42P60953 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.55■□□□□ 0.56
CDC42P60953 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.55■□□□□ 0.56
CDC42P60953 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.55■□□□□ 0.56
CDC42P60953 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.55■□□□□ 0.56
CDC42P60953 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.55■□□□□ 0.56
CDC42P60953 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.55■□□□□ 0.56
CDC42P60953 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDC42P60953 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDC42P60953 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDC42P60953 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.54■□□□□ 0.56
CDC42P60953 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CDC42P60953 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CDC42P60953 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.54■□□□□ 0.56
CDC42P60953 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.54■□□□□ 0.56
CDC42P60953 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.54■□□□□ 0.56
CDC42P60953 IGHV3-19-201ENST00000521488 291 ntBASIC18.54■□□□□ 0.56
CDC42P60953 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.54■□□□□ 0.56
CDC42P60953 AC126544.1-201ENST00000580842 1059 ntBASIC18.54■□□□□ 0.56
CDC42P60953 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 AC053503.5-201ENST00000601508 636 ntBASIC18.54■□□□□ 0.56
CDC42P60953 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.54■□□□□ 0.56
CDC42P60953 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.54■□□□□ 0.56
CDC42P60953 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.54■□□□□ 0.56
CDC42P60953 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC42P60953 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.54■□□□□ 0.56
CDC42P60953 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDC42P60953 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CDC42P60953 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CDC42P60953 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.53■□□□□ 0.56
CDC42P60953 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CDC42P60953 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDC42P60953 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDC42P60953 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.53■□□□□ 0.56
CDC42P60953 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms