Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
APOC4P55056 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOC4P55056 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOC4P55056 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
APOC4P55056 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOC4P55056 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC4P55056 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
APOC4P55056 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC14.93□□□□□ -0.02
APOC4P55056 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC4P55056 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC4P55056 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC4P55056 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC4P55056 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOC4P55056 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC4P55056 UNC93B5-201ENST00000530315 699 ntBASIC14.93□□□□□ -0.02
APOC4P55056 AP003097.1-201ENST00000530657 1135 ntBASIC14.93□□□□□ -0.02
APOC4P55056 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
APOC4P55056 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOC4P55056 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.93□□□□□ -0.02
APOC4P55056 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.93□□□□□ -0.02
APOC4P55056 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
APOC4P55056 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC4P55056 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
APOC4P55056 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
APOC4P55056 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC4P55056 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC4P55056 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOC4P55056 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
APOC4P55056 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.93□□□□□ -0.02
APOC4P55056 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.93□□□□□ -0.02
APOC4P55056 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
APOC4P55056 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOC4P55056 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
APOC4P55056 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC4P55056 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC4P55056 AC121338.2-201ENST00000622535 1744 ntBASIC14.92□□□□□ -0.02
APOC4P55056 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOC4P55056 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOC4P55056 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC14.92□□□□□ -0.02
APOC4P55056 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC4P55056 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC4P55056 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOC4P55056 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC4P55056 AL390719.1-204ENST00000412397 1219 ntBASIC14.92□□□□□ -0.02
APOC4P55056 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOC4P55056 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
APOC4P55056 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
APOC4P55056 AC026366.1-201ENST00000488803 879 ntBASIC14.92□□□□□ -0.02
APOC4P55056 PNMA6B-201ENST00000538162 1200 ntBASIC14.92□□□□□ -0.02
APOC4P55056 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
APOC4P55056 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
APOC4P55056 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC4P55056 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOC4P55056 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC14.92□□□□□ -0.02
APOC4P55056 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOC4P55056 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.92□□□□□ -0.02
APOC4P55056 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.92□□□□□ -0.02
APOC4P55056 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.92□□□□□ -0.02
APOC4P55056 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC4P55056 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC4P55056 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOC4P55056 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC4P55056 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC4P55056 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC4P55056 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOC4P55056 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC4P55056 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC4P55056 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.91□□□□□ -0.02
APOC4P55056 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
APOC4P55056 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.91□□□□□ -0.02
APOC4P55056 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.91□□□□□ -0.02
APOC4P55056 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.91□□□□□ -0.02
APOC4P55056 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.91□□□□□ -0.02
APOC4P55056 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.91□□□□□ -0.02
APOC4P55056 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
APOC4P55056 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOC4P55056 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC4P55056 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOC4P55056 AC138932.1-201ENST00000534164 6830 ntBASIC14.91□□□□□ -0.02
APOC4P55056 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC4P55056 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
APOC4P55056 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC4P55056 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC4P55056 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOC4P55056 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
APOC4P55056 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
APOC4P55056 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.9□□□□□ -0.02
APOC4P55056 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
APOC4P55056 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
APOC4P55056 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms