Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
EPHA4P54764 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.65■□□□□ 0.74
EPHA4P54764 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
EPHA4P54764 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.65■□□□□ 0.74
EPHA4P54764 RPS2P52-201ENST00000469610 820 ntBASIC19.65■□□□□ 0.74
EPHA4P54764 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.65■□□□□ 0.74
EPHA4P54764 AC142381.4-202ENST00000563973 229 ntBASIC19.65■□□□□ 0.74
EPHA4P54764 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.65■□□□□ 0.74
EPHA4P54764 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.65■□□□□ 0.74
EPHA4P54764 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.65■□□□□ 0.74
EPHA4P54764 AP006294.2-201ENST00000641667 209 ntBASIC19.65■□□□□ 0.74
EPHA4P54764 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.65■□□□□ 0.74
EPHA4P54764 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.65■□□□□ 0.74
EPHA4P54764 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.65■□□□□ 0.74
EPHA4P54764 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EPHA4P54764 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHA4P54764 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
EPHA4P54764 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
EPHA4P54764 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EPHA4P54764 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EPHA4P54764 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.64■□□□□ 0.73
EPHA4P54764 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.64■□□□□ 0.73
EPHA4P54764 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
EPHA4P54764 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
EPHA4P54764 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.64■□□□□ 0.73
EPHA4P54764 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EPHA4P54764 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
EPHA4P54764 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EPHA4P54764 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
EPHA4P54764 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EPHA4P54764 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.64■□□□□ 0.73
EPHA4P54764 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EPHA4P54764 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EPHA4P54764 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
EPHA4P54764 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.64■□□□□ 0.73
EPHA4P54764 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA4P54764 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
EPHA4P54764 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA4P54764 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.63■□□□□ 0.73
EPHA4P54764 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA4P54764 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA4P54764 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
EPHA4P54764 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA4P54764 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA4P54764 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA4P54764 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA4P54764 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA4P54764 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.63■□□□□ 0.73
EPHA4P54764 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.63■□□□□ 0.73
EPHA4P54764 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.63■□□□□ 0.73
EPHA4P54764 POM121L13P-201ENST00000422362 380 ntBASIC19.63■□□□□ 0.73
EPHA4P54764 AC093827.2-201ENST00000512654 315 ntBASIC19.63■□□□□ 0.73
EPHA4P54764 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.63■□□□□ 0.73
EPHA4P54764 AC005829.2-201ENST00000571422 1056 ntBASIC19.63■□□□□ 0.73
EPHA4P54764 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
EPHA4P54764 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.63■□□□□ 0.73
EPHA4P54764 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA4P54764 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
EPHA4P54764 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA4P54764 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EPHA4P54764 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EPHA4P54764 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
EPHA4P54764 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.62■□□□□ 0.73
EPHA4P54764 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EPHA4P54764 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.62■□□□□ 0.73
EPHA4P54764 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EPHA4P54764 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EPHA4P54764 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
EPHA4P54764 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EPHA4P54764 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EPHA4P54764 AL158047.1-201ENST00000445918 881 ntBASIC19.62■□□□□ 0.73
EPHA4P54764 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EPHA4P54764 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.62■□□□□ 0.73
EPHA4P54764 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.62■□□□□ 0.73
EPHA4P54764 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.62■□□□□ 0.73
EPHA4P54764 MIR2861-201ENST00000636310 90 ntBASIC19.62■□□□□ 0.73
EPHA4P54764 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EPHA4P54764 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EPHA4P54764 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.62■□□□□ 0.73
EPHA4P54764 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EPHA4P54764 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.62■□□□□ 0.73
EPHA4P54764 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.61■□□□□ 0.73
EPHA4P54764 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHA4P54764 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.61■□□□□ 0.73
EPHA4P54764 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.61■□□□□ 0.73
EPHA4P54764 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHA4P54764 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
EPHA4P54764 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EPHA4P54764 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
EPHA4P54764 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
EPHA4P54764 AC069544.1-201ENST00000609399 999 ntBASIC19.61■□□□□ 0.73
EPHA4P54764 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHA4P54764 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHA4P54764 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHA4P54764 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHA4P54764 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHA4P54764 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA4P54764 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA4P54764 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.6■□□□□ 0.73
EPHA4P54764 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms