Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.53■□□□□ 0.88
LIMK2P53671 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LIMK2P53671 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.52■□□□□ 0.88
LIMK2P53671 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LIMK2P53671 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LIMK2P53671 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LIMK2P53671 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LIMK2P53671 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.52■□□□□ 0.88
LIMK2P53671 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LIMK2P53671 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
LIMK2P53671 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.52■□□□□ 0.88
LIMK2P53671 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LIMK2P53671 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LIMK2P53671 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
LIMK2P53671 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LIMK2P53671 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.51■□□□□ 0.87
LIMK2P53671 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.51■□□□□ 0.87
LIMK2P53671 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LIMK2P53671 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
LIMK2P53671 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LIMK2P53671 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.51■□□□□ 0.87
LIMK2P53671 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LIMK2P53671 AC245052.3-201ENST00000450182 901 ntBASIC20.51■□□□□ 0.87
LIMK2P53671 AC083906.2-201ENST00000511578 360 ntBASIC20.51■□□□□ 0.87
LIMK2P53671 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.51■□□□□ 0.87
LIMK2P53671 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
LIMK2P53671 AC005181.1-201ENST00000604782 1256 ntBASIC20.51■□□□□ 0.87
LIMK2P53671 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.51■□□□□ 0.87
LIMK2P53671 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.51■□□□□ 0.87
LIMK2P53671 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LIMK2P53671 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.51■□□□□ 0.87
LIMK2P53671 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.51■□□□□ 0.87
LIMK2P53671 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LIMK2P53671 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LIMK2P53671 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LIMK2P53671 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LIMK2P53671 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LIMK2P53671 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LIMK2P53671 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LIMK2P53671 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.5■□□□□ 0.87
LIMK2P53671 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.5■□□□□ 0.87
LIMK2P53671 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LIMK2P53671 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LIMK2P53671 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LIMK2P53671 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LIMK2P53671 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.5■□□□□ 0.87
LIMK2P53671 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LIMK2P53671 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LIMK2P53671 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.5■□□□□ 0.87
LIMK2P53671 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LIMK2P53671 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LIMK2P53671 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.5■□□□□ 0.87
LIMK2P53671 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.5■□□□□ 0.87
LIMK2P53671 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LIMK2P53671 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.5■□□□□ 0.87
LIMK2P53671 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LIMK2P53671 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LIMK2P53671 AL121603.2-201ENST00000557373 2117 ntBASIC20.5■□□□□ 0.87
LIMK2P53671 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LIMK2P53671 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LIMK2P53671 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LIMK2P53671 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LIMK2P53671 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LIMK2P53671 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LIMK2P53671 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LIMK2P53671 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.49■□□□□ 0.87
LIMK2P53671 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LIMK2P53671 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LIMK2P53671 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.49■□□□□ 0.87
LIMK2P53671 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LIMK2P53671 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.49■□□□□ 0.87
LIMK2P53671 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.49■□□□□ 0.87
LIMK2P53671 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
LIMK2P53671 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LIMK2P53671 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.49■□□□□ 0.87
LIMK2P53671 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.49■□□□□ 0.87
LIMK2P53671 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LIMK2P53671 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LIMK2P53671 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LIMK2P53671 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.49■□□□□ 0.87
LIMK2P53671 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LIMK2P53671 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.48■□□□□ 0.87
LIMK2P53671 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LIMK2P53671 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.48■□□□□ 0.87
LIMK2P53671 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LIMK2P53671 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.48■□□□□ 0.87
LIMK2P53671 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LIMK2P53671 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
LIMK2P53671 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.48■□□□□ 0.87
LIMK2P53671 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LIMK2P53671 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.48■□□□□ 0.87
LIMK2P53671 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LIMK2P53671 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LIMK2P53671 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LIMK2P53671 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LIMK2P53671 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LIMK2P53671 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LIMK2P53671 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LIMK2P53671 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.48■□□□□ 0.87
LIMK2P53671 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms