Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.43■□□□□ 0.86
NUBP1P53384 ARL4AP4-201ENST00000434170 518 ntBASIC20.43■□□□□ 0.86
NUBP1P53384 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUBP1P53384 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.43■□□□□ 0.86
NUBP1P53384 AC128688.1-201ENST00000487626 519 ntBASIC20.43■□□□□ 0.86
NUBP1P53384 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NUBP1P53384 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.43■□□□□ 0.86
NUBP1P53384 AC060766.1-201ENST00000590824 627 ntBASIC20.43■□□□□ 0.86
NUBP1P53384 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.43■□□□□ 0.86
NUBP1P53384 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUBP1P53384 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.43■□□□□ 0.86
NUBP1P53384 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.43■□□□□ 0.86
NUBP1P53384 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUBP1P53384 ANOS2P-203ENST00000472227 1816 ntBASIC20.42■□□□□ 0.86
NUBP1P53384 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NUBP1P53384 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUBP1P53384 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NUBP1P53384 CRYGFP-201ENST00000418459 633 ntBASIC20.42■□□□□ 0.86
NUBP1P53384 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.42■□□□□ 0.86
NUBP1P53384 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.42■□□□□ 0.86
NUBP1P53384 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NUBP1P53384 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.42■□□□□ 0.86
NUBP1P53384 MIR3908-201ENST00000579798 126 ntBASIC20.42■□□□□ 0.86
NUBP1P53384 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NUBP1P53384 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NUBP1P53384 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUBP1P53384 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUBP1P53384 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.42■□□□□ 0.86
NUBP1P53384 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NUBP1P53384 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.41■□□□□ 0.86
NUBP1P53384 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.41■□□□□ 0.86
NUBP1P53384 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NUBP1P53384 TSPY14P-201ENST00000303979 915 ntBASIC20.41■□□□□ 0.86
NUBP1P53384 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUBP1P53384 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUBP1P53384 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.41■□□□□ 0.86
NUBP1P53384 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.41■□□□□ 0.86
NUBP1P53384 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.41■□□□□ 0.86
NUBP1P53384 RN7SL718P-201ENST00000581254 303 ntBASIC20.41■□□□□ 0.86
NUBP1P53384 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NUBP1P53384 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.41■□□□□ 0.86
NUBP1P53384 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NUBP1P53384 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.41■□□□□ 0.86
NUBP1P53384 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NUBP1P53384 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUBP1P53384 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUBP1P53384 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NUBP1P53384 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUBP1P53384 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NUBP1P53384 AL031133.1-201ENST00000406807 723 ntBASIC20.4■□□□□ 0.86
NUBP1P53384 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.4■□□□□ 0.86
NUBP1P53384 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUBP1P53384 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.4■□□□□ 0.86
NUBP1P53384 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NUBP1P53384 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NUBP1P53384 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.4■□□□□ 0.86
NUBP1P53384 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.4■□□□□ 0.86
NUBP1P53384 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.4■□□□□ 0.86
NUBP1P53384 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.4■□□□□ 0.86
NUBP1P53384 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.4■□□□□ 0.86
NUBP1P53384 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
NUBP1P53384 AL691432.3-201ENST00000621860 400 ntBASIC20.4■□□□□ 0.86
NUBP1P53384 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.4■□□□□ 0.86
NUBP1P53384 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NUBP1P53384 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
NUBP1P53384 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NUBP1P53384 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NUBP1P53384 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NUBP1P53384 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.39■□□□□ 0.86
NUBP1P53384 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.39■□□□□ 0.85
NUBP1P53384 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUBP1P53384 DUSP5P1-201ENST00000441325 1139 ntBASIC20.39■□□□□ 0.85
NUBP1P53384 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.39■□□□□ 0.85
NUBP1P53384 AP005242.2-201ENST00000580065 1175 ntBASIC20.39■□□□□ 0.85
NUBP1P53384 AL121906.2-201ENST00000621597 723 ntBASIC20.39■□□□□ 0.85
NUBP1P53384 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.39■□□□□ 0.85
NUBP1P53384 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
NUBP1P53384 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NUBP1P53384 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NUBP1P53384 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUBP1P53384 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
NUBP1P53384 KRT16P1-201ENST00000399124 1418 ntBASIC20.38■□□□□ 0.85
NUBP1P53384 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.38■□□□□ 0.85
NUBP1P53384 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NUBP1P53384 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NUBP1P53384 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUBP1P53384 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NUBP1P53384 NIFKP9-201ENST00000419265 221 ntBASIC20.38■□□□□ 0.85
NUBP1P53384 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.38■□□□□ 0.85
NUBP1P53384 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.38■□□□□ 0.85
NUBP1P53384 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUBP1P53384 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUBP1P53384 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
NUBP1P53384 LINC01124-201ENST00000409786 2117 ntBASIC20.38■□□□□ 0.85
NUBP1P53384 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUBP1P53384 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.37■□□□□ 0.85
NUBP1P53384 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NUBP1P53384 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUBP1P53384 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUBP1P53384 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms