Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
LBX1P52954 AC069148.1-201ENST00000608741 768 ntBASIC23.37■■□□□ 1.33
LBX1P52954 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC23.37■■□□□ 1.33
LBX1P52954 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LBX1P52954 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
LBX1P52954 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LBX1P52954 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
LBX1P52954 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
LBX1P52954 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LBX1P52954 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.36■■□□□ 1.33
LBX1P52954 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LBX1P52954 BET1L-202ENST00000332865 533 ntTSL 5 BASIC23.36■■□□□ 1.33
LBX1P52954 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
LBX1P52954 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.36■■□□□ 1.33
LBX1P52954 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LBX1P52954 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
LBX1P52954 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC23.36■■□□□ 1.33
LBX1P52954 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.36■■□□□ 1.33
LBX1P52954 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.36■■□□□ 1.33
LBX1P52954 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.36■■□□□ 1.33
LBX1P52954 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.36■■□□□ 1.33
LBX1P52954 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
LBX1P52954 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
LBX1P52954 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
LBX1P52954 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LBX1P52954 AC003102.1-202ENST00000563394 1796 ntBASIC23.35■■□□□ 1.33
LBX1P52954 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.35■■□□□ 1.33
LBX1P52954 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC23.35■■□□□ 1.33
LBX1P52954 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.35■■□□□ 1.33
LBX1P52954 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC23.35■■□□□ 1.33
LBX1P52954 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC23.35■■□□□ 1.33
LBX1P52954 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.35■■□□□ 1.33
LBX1P52954 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
LBX1P52954 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC23.34■■□□□ 1.33
LBX1P52954 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.34■■□□□ 1.33
LBX1P52954 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
LBX1P52954 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LBX1P52954 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LBX1P52954 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
LBX1P52954 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC23.34■■□□□ 1.33
LBX1P52954 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC23.34■■□□□ 1.33
LBX1P52954 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC23.34■■□□□ 1.33
LBX1P52954 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
LBX1P52954 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC23.34■■□□□ 1.33
LBX1P52954 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LBX1P52954 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.33■■□□□ 1.33
LBX1P52954 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LBX1P52954 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
LBX1P52954 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LBX1P52954 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LBX1P52954 C11orf96-202ENST00000528572 1834 ntBASIC23.33■■□□□ 1.33
LBX1P52954 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LBX1P52954 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LBX1P52954 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
LBX1P52954 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
LBX1P52954 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LBX1P52954 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LBX1P52954 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LBX1P52954 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.33■■□□□ 1.33
LBX1P52954 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LBX1P52954 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC23.33■■□□□ 1.33
LBX1P52954 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC23.33■■□□□ 1.33
LBX1P52954 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC23.33■■□□□ 1.33
LBX1P52954 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.33■■□□□ 1.33
LBX1P52954 RN7SL510P-201ENST00000581311 263 ntBASIC23.33■■□□□ 1.33
LBX1P52954 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC23.33■■□□□ 1.33
LBX1P52954 CR769767.2-201ENST00000622735 460 ntBASIC23.33■■□□□ 1.33
LBX1P52954 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
LBX1P52954 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LBX1P52954 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LBX1P52954 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
LBX1P52954 AC138932.3-201ENST00000567634 1902 ntBASIC23.32■■□□□ 1.32
LBX1P52954 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LBX1P52954 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LBX1P52954 NIFKP9-201ENST00000419265 221 ntBASIC23.32■■□□□ 1.32
LBX1P52954 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.32■■□□□ 1.32
LBX1P52954 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC23.32■■□□□ 1.32
LBX1P52954 AL138966.2-201ENST00000621997 464 ntBASIC23.32■■□□□ 1.32
LBX1P52954 AC116407.4-201ENST00000623319 1061 ntBASIC23.32■■□□□ 1.32
LBX1P52954 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LBX1P52954 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.32■■□□□ 1.32
LBX1P52954 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.32■■□□□ 1.32
LBX1P52954 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LBX1P52954 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
LBX1P52954 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.32■■□□□ 1.32
LBX1P52954 AC005332.1-201ENST00000577698 1310 ntBASIC23.32■■□□□ 1.32
LBX1P52954 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LBX1P52954 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LBX1P52954 AC124283.5-201ENST00000624661 1809 ntBASIC23.31■■□□□ 1.32
LBX1P52954 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
LBX1P52954 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
LBX1P52954 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
LBX1P52954 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.31■■□□□ 1.32
LBX1P52954 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LBX1P52954 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LBX1P52954 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC23.31■■□□□ 1.32
LBX1P52954 PGM5P4-201ENST00000421970 445 ntBASIC23.31■■□□□ 1.32
LBX1P52954 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC23.31■■□□□ 1.32
LBX1P52954 AP005242.2-201ENST00000580065 1175 ntBASIC23.31■■□□□ 1.32
LBX1P52954 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms