Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1EP49674 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1EP49674 AC233723.2-201ENST00000623798 2106 ntBASIC20.05■□□□□ 0.8
CSNK1EP49674 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1EP49674 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1EP49674 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1EP49674 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1EP49674 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1EP49674 TSPY15P-201ENST00000457163 923 ntBASIC20.05■□□□□ 0.8
CSNK1EP49674 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1EP49674 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.05■□□□□ 0.8
CSNK1EP49674 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
CSNK1EP49674 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1EP49674 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1EP49674 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1EP49674 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CSNK1EP49674 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.05■□□□□ 0.8
CSNK1EP49674 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1EP49674 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.04■□□□□ 0.8
CSNK1EP49674 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1EP49674 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1EP49674 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1EP49674 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1EP49674 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1EP49674 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1EP49674 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1EP49674 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1EP49674 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1EP49674 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1EP49674 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.04■□□□□ 0.8
CSNK1EP49674 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1EP49674 KRT18P21-201ENST00000515767 1272 ntBASIC20.04■□□□□ 0.8
CSNK1EP49674 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.04■□□□□ 0.8
CSNK1EP49674 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.04■□□□□ 0.8
CSNK1EP49674 AC113410.3-201ENST00000623366 203 ntBASIC20.04■□□□□ 0.8
CSNK1EP49674 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.04■□□□□ 0.8
CSNK1EP49674 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1EP49674 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.04■□□□□ 0.8
CSNK1EP49674 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.04■□□□□ 0.8
CSNK1EP49674 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1EP49674 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1EP49674 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1EP49674 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.03■□□□□ 0.8
CSNK1EP49674 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1EP49674 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CSNK1EP49674 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1EP49674 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1EP49674 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CSNK1EP49674 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1EP49674 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.03■□□□□ 0.8
CSNK1EP49674 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.03■□□□□ 0.8
CSNK1EP49674 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.03■□□□□ 0.8
CSNK1EP49674 MIR4785-201ENST00000585005 73 ntBASIC20.03■□□□□ 0.8
CSNK1EP49674 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.03■□□□□ 0.8
CSNK1EP49674 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.03■□□□□ 0.8
CSNK1EP49674 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1EP49674 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1EP49674 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.03■□□□□ 0.8
CSNK1EP49674 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1EP49674 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1EP49674 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CSNK1EP49674 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1EP49674 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1EP49674 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CSNK1EP49674 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1EP49674 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1EP49674 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1EP49674 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.02■□□□□ 0.8
CSNK1EP49674 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1EP49674 PRKY-204ENST00000533551 1019 ntBASIC20.02■□□□□ 0.8
CSNK1EP49674 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.02■□□□□ 0.8
CSNK1EP49674 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.02■□□□□ 0.8
CSNK1EP49674 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1EP49674 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
CSNK1EP49674 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CSNK1EP49674 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1EP49674 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1EP49674 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CSNK1EP49674 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1EP49674 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1EP49674 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CSNK1EP49674 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CSNK1EP49674 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CSNK1EP49674 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CSNK1EP49674 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CSNK1EP49674 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1EP49674 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CSNK1EP49674 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1EP49674 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.01■□□□□ 0.79
CSNK1EP49674 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1EP49674 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1EP49674 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CSNK1EP49674 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1EP49674 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1EP49674 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.01■□□□□ 0.79
CSNK1EP49674 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1EP49674 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1EP49674 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.01■□□□□ 0.79
CSNK1EP49674 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.01■□□□□ 0.79
CSNK1EP49674 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms