Protein–RNA interactions for Protein: P45978

SCD6, Protein SCD6, yeastyeast

Known RBP RIP-Chip data

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCD6P45978 TFC3YAL001C 3483 nt2.34□□□□□ -2.04
SCD6P45978 NIC96YFR002W 2520 nt2.33□□□□□ -2.04
SCD6P45978 ORC2YBR060C 1863 nt2.33□□□□□ -2.04 RIP-Chip
SCD6P45978 AMS1YGL156W 3252 nt2.33□□□□□ -2.04 RIP-Chip
SCD6P45978 YDR209CYDR209C 414 nt2.33□□□□□ -2.04
SCD6P45978 ATP17YDR377W 306 nt2.33□□□□□ -2.04
SCD6P45978 RRF1YHR038W 693 nt2.33□□□□□ -2.04
SCD6P45978 KTI11YBL071W-A 249 nt2.33□□□□□ -2.04
SCD6P45978 ACM1YPL267W 630 nt2.33□□□□□ -2.04 RIP-Chip
SCD6P45978 ATP15YPL271W 189 nt2.33□□□□□ -2.04 RIP-Chip
SCD6P45978 YBR197CYBR197C 654 nt2.33□□□□□ -2.04
SCD6P45978 YBR285WYBR285W 435 nt2.33□□□□□ -2.04
SCD6P45978 UBP1YDL122W 2430 nt2.33□□□□□ -2.04
SCD6P45978 FAR11YNL127W 2862 nt2.33□□□□□ -2.04
SCD6P45978 CAJ1YER048C 1176 nt2.32□□□□□ -2.04 RIP-Chip
SCD6P45978 tT(UGU)Q1tT(UGU)Q1 76 nt2.32□□□□□ -2.04
SCD6P45978 IRC19YLL033W 693 nt2.32□□□□□ -2.04
SCD6P45978 ZEO1YOL109W 342 nt2.32□□□□□ -2.04 RIP-Chip
SCD6P45978 YOR053WYOR053W 342 nt2.32□□□□□ -2.04
SCD6P45978 MGR1YCL044C 1254 nt2.32□□□□□ -2.04
SCD6P45978 MLH1YMR167W 2310 nt2.32□□□□□ -2.04 RIP-Chip
SCD6P45978 YPK1YKL126W 2043 nt2.32□□□□□ -2.04 RIP-Chip
SCD6P45978 ASG1YIL130W 2895 nt2.31□□□□□ -2.04
SCD6P45978 KOG1YHR186C 4674 nt2.31□□□□□ -2.04 RIP-Chip
SCD6P45978 SSQ1YLR369W 1974 nt2.31□□□□□ -2.04 RIP-Chip
SCD6P45978 ALK2YBL009W 2031 nt2.31□□□□□ -2.04
SCD6P45978 REV3YPL167C 4515 nt2.31□□□□□ -2.04 RIP-Chip
SCD6P45978 YDL068WYDL068W 330 nt2.31□□□□□ -2.04
SCD6P45978 YDR524W-CYDR524W-C 90 nt2.31□□□□□ -2.04
SCD6P45978 BRP1YGL007W 378 nt2.31□□□□□ -2.04
SCD6P45978 RAM2YKL019W 951 nt2.31□□□□□ -2.04
SCD6P45978 YAL068W-AYAL068W-A 255 nt2.31□□□□□ -2.04
SCD6P45978 RPS29AYLR388W 171 nt2.31□□□□□ -2.04
SCD6P45978 ERP4YOR016C 624 nt2.31□□□□□ -2.04
SCD6P45978 YCL023CYCL023C 348 nt2.31□□□□□ -2.04
SCD6P45978 YJL016WYJL016W 1686 nt2.31□□□□□ -2.04
SCD6P45978 SIR3YLR442C 2937 nt2.31□□□□□ -2.04
SCD6P45978 YGR050CYGR050C 357 nt2.3□□□□□ -2.04
SCD6P45978 VOA1YGR106C 798 nt2.3□□□□□ -2.04
SCD6P45978 PEX4YGR133W 552 nt2.3□□□□□ -2.04
SCD6P45978 YHR139C-AYHR139C-A 312 nt2.3□□□□□ -2.04
SCD6P45978 YJL052C-AYJL052C-A 120 nt2.3□□□□□ -2.04
SCD6P45978 YAR047CYAR047C 321 nt2.3□□□□□ -2.04
SCD6P45978 RPS22BYLR367W 393 nt2.3□□□□□ -2.04
SCD6P45978 YLR458WYLR458W 381 nt2.3□□□□□ -2.04
SCD6P45978 NUP82YJL061W 2142 nt2.3□□□□□ -2.04 RIP-Chip
SCD6P45978 SGM1YJR134C 2124 nt2.3□□□□□ -2.04 RIP-Chip
SCD6P45978 SDC25YLL016W 3147 nt2.29□□□□□ -2.04
SCD6P45978 YHL009W-AYHL009W-A 1242 nt2.29□□□□□ -2.04
SCD6P45978 NCE101YJL205C 162 nt2.29□□□□□ -2.04
SCD6P45978 PET191YJR034W 327 nt2.29□□□□□ -2.04
SCD6P45978 RNP1YLL046C 750 nt2.29□□□□□ -2.04
SCD6P45978 RPL36AYMR194W 303 nt2.29□□□□□ -2.04
SCD6P45978 SWA2YDR320C 2007 nt2.29□□□□□ -2.04 RIP-Chip
SCD6P45978 DAS1YJL149W 1992 nt2.29□□□□□ -2.04 RIP-Chip
SCD6P45978 KRE33YNL132W 3171 nt2.28□□□□□ -2.04
SCD6P45978 SNX41YDR425W 1878 nt2.28□□□□□ -2.04 RIP-Chip
SCD6P45978 YSW1YBR148W 1830 nt2.28□□□□□ -2.04 RIP-Chip
SCD6P45978 CBS1YDL069C 690 nt2.28□□□□□ -2.04 RIP-Chip
SCD6P45978 SDH7YDR511W 402 nt2.28□□□□□ -2.04 RIP-Chip
SCD6P45978 RPL40AYIL148W 387 nt2.28□□□□□ -2.04
SCD6P45978 YOR029WYOR029W 336 nt2.28□□□□□ -2.04
SCD6P45978 TOR2YKL203C 7425 nt2.28□□□□□ -2.04
SCD6P45978 YJL181WYJL181W 1836 nt2.28□□□□□ -2.04 RIP-Chip
SCD6P45978 KSP1YHR082C 3090 nt2.28□□□□□ -2.05
SCD6P45978 YPR089WYPR089W 2667 nt2.27□□□□□ -2.05
SCD6P45978 EMP24YGL200C 612 nt2.27□□□□□ -2.05
SCD6P45978 LCL1YPL056C 306 nt2.27□□□□□ -2.05
SCD6P45978 SPC72YAL047C 1869 nt2.26□□□□□ -2.05
SCD6P45978 PES4YFR023W 1836 nt2.26□□□□□ -2.05 RIP-Chip
SCD6P45978 DNF1YER166W 4716 nt2.26□□□□□ -2.05 RIP-Chip
SCD6P45978 YER068C-AYER068C-A 432 nt2.26□□□□□ -2.05
SCD6P45978 YER079C-AYER079C-A 339 nt2.26□□□□□ -2.05
SCD6P45978 YLR031WYLR031W 561 nt2.26□□□□□ -2.05
SCD6P45978 COX7YMR256C 183 nt2.26□□□□□ -2.05
SCD6P45978 YOR192C-CYOR192C-C 237 nt2.26□□□□□ -2.05
SCD6P45978 VPS52YDR484W 1926 nt2.26□□□□□ -2.05
SCD6P45978 YNL018CYNL018C 1839 nt2.26□□□□□ -2.05
SCD6P45978 SAP185YJL098W 3177 nt2.25□□□□□ -2.05
SCD6P45978 HRD3YLR207W 2502 nt2.25□□□□□ -2.05
SCD6P45978 NFT1YKR103W 3657 nt2.25□□□□□ -2.05 RIP-Chip
SCD6P45978 PRP6YBR055C 2700 nt2.25□□□□□ -2.05 RIP-Chip
SCD6P45978 BRE1YDL074C 2103 nt2.25□□□□□ -2.05 RIP-Chip
SCD6P45978 ATG31YDR022C 591 nt2.25□□□□□ -2.05 RIP-Chip
SCD6P45978 HYP2YEL034W 474 nt2.25□□□□□ -2.05
SCD6P45978 YER076W-AYER076W-A 348 nt2.25□□□□□ -2.05
SCD6P45978 CRS5YOR031W 210 nt2.25□□□□□ -2.05 RIP-Chip
SCD6P45978 YBR012CYBR012C 420 nt2.25□□□□□ -2.05
SCD6P45978 YPL185WYPL185W 396 nt2.25□□□□□ -2.05
SCD6P45978 MKT1YNL085W 2493 nt2.25□□□□□ -2.05
SCD6P45978 SRB8YCR081W 4284 nt2.25□□□□□ -2.05
SCD6P45978 PHO2YDL106C 1680 nt2.25□□□□□ -2.05 RIP-Chip
SCD6P45978 YOL098CYOL098C 3114 nt2.24□□□□□ -2.05
SCD6P45978 YDL041WYDL041W 354 nt2.24□□□□□ -2.05
SCD6P45978 RPS24BYIL069C 408 nt2.24□□□□□ -2.05
SCD6P45978 YJL202CYJL202C 348 nt2.24□□□□□ -2.05
SCD6P45978 YAL059C-AYAL059C-A 423 nt2.24□□□□□ -2.05
SCD6P45978 BSC3YLR465C 309 nt2.24□□□□□ -2.05
SCD6P45978 EGD1YPL037C 474 nt2.24□□□□□ -2.05
SCD6P45978 HOS4YIL112W 3252 nt2.24□□□□□ -2.05 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms