Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NKX2-1P43699 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.63■□□□□ 0.25
NKX2-1P43699 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-1P43699 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-1P43699 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-1P43699 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NKX2-1P43699 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-1P43699 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-1P43699 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-1P43699 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-1P43699 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.63■□□□□ 0.25
NKX2-1P43699 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-1P43699 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.63■□□□□ 0.25
NKX2-1P43699 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-1P43699 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.63■□□□□ 0.25
NKX2-1P43699 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-1P43699 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-1P43699 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.63■□□□□ 0.25
NKX2-1P43699 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.63■□□□□ 0.25
NKX2-1P43699 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.63■□□□□ 0.25
NKX2-1P43699 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.63■□□□□ 0.25
NKX2-1P43699 AC136469.2-201ENST00000623944 1028 ntBASIC16.63■□□□□ 0.25
NKX2-1P43699 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-1P43699 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-1P43699 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.63■□□□□ 0.25
NKX2-1P43699 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.63■□□□□ 0.25
NKX2-1P43699 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-1P43699 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.63■□□□□ 0.25
NKX2-1P43699 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-1P43699 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-1P43699 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-1P43699 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-1P43699 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-1P43699 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-1P43699 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-1P43699 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-1P43699 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-1P43699 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.62■□□□□ 0.25
NKX2-1P43699 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-1P43699 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
NKX2-1P43699 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-1P43699 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
NKX2-1P43699 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-1P43699 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
NKX2-1P43699 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-1P43699 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NKX2-1P43699 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.62■□□□□ 0.25
NKX2-1P43699 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-1P43699 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-1P43699 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NKX2-1P43699 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NKX2-1P43699 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-1P43699 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-1P43699 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
NKX2-1P43699 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NKX2-1P43699 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-1P43699 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-1P43699 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-1P43699 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.62■□□□□ 0.25
NKX2-1P43699 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-1P43699 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.61■□□□□ 0.25
NKX2-1P43699 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NKX2-1P43699 AL158211.5-201ENST00000623583 2518 ntBASIC16.61■□□□□ 0.25
NKX2-1P43699 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NKX2-1P43699 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-1P43699 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.61■□□□□ 0.25
NKX2-1P43699 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-1P43699 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-1P43699 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-1P43699 SERBP1P1-201ENST00000396021 1160 ntBASIC16.61■□□□□ 0.25
NKX2-1P43699 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.61■□□□□ 0.25
NKX2-1P43699 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.61■□□□□ 0.25
NKX2-1P43699 DUX4L19-201ENST00000557448 1267 ntBASIC16.61■□□□□ 0.25
NKX2-1P43699 MIR3621-201ENST00000580529 85 ntBASIC16.61■□□□□ 0.25
NKX2-1P43699 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NKX2-1P43699 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-1P43699 AC120498.9-201ENST00000339021 3867 ntBASIC16.61■□□□□ 0.25
NKX2-1P43699 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-1P43699 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-1P43699 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-1P43699 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-1P43699 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-1P43699 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-1P43699 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.61■□□□□ 0.25
NKX2-1P43699 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-1P43699 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-1P43699 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.6■□□□□ 0.25
NKX2-1P43699 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.6■□□□□ 0.25
NKX2-1P43699 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-1P43699 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-1P43699 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NKX2-1P43699 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.6■□□□□ 0.25
NKX2-1P43699 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.6■□□□□ 0.25
NKX2-1P43699 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.6■□□□□ 0.25
NKX2-1P43699 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-1P43699 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NKX2-1P43699 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-1P43699 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-1P43699 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.6■□□□□ 0.25
NKX2-1P43699 AC055733.4-201ENST00000638462 1354 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms