Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HNF4AP41235 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HNF4AP41235 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.71■□□□□ 0.75
HNF4AP41235 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HNF4AP41235 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
HNF4AP41235 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HNF4AP41235 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HNF4AP41235 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HNF4AP41235 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.71■□□□□ 0.75
HNF4AP41235 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
HNF4AP41235 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.71■□□□□ 0.75
HNF4AP41235 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.71■□□□□ 0.75
HNF4AP41235 AL591742.1-201ENST00000604433 565 ntBASIC19.71■□□□□ 0.75
HNF4AP41235 FAM21FP-204ENST00000608637 956 ntBASIC19.71■□□□□ 0.75
HNF4AP41235 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
HNF4AP41235 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.71■□□□□ 0.75
HNF4AP41235 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HNF4AP41235 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HNF4AP41235 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.71■□□□□ 0.75
HNF4AP41235 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HNF4AP41235 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HNF4AP41235 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HNF4AP41235 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HNF4AP41235 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HNF4AP41235 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HNF4AP41235 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HNF4AP41235 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HNF4AP41235 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HNF4AP41235 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.71■□□□□ 0.75
HNF4AP41235 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
HNF4AP41235 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HNF4AP41235 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HNF4AP41235 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.7■□□□□ 0.74
HNF4AP41235 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HNF4AP41235 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HNF4AP41235 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.7■□□□□ 0.74
HNF4AP41235 AL162412.1-201ENST00000567129 965 ntBASIC19.7■□□□□ 0.74
HNF4AP41235 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.7■□□□□ 0.74
HNF4AP41235 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.7■□□□□ 0.74
HNF4AP41235 AC013268.1-206ENST00000638368 961 ntBASIC19.7■□□□□ 0.74
HNF4AP41235 AC112229.1-201ENST00000639295 961 ntBASIC19.7■□□□□ 0.74
HNF4AP41235 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.7■□□□□ 0.74
HNF4AP41235 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HNF4AP41235 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HNF4AP41235 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HNF4AP41235 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HNF4AP41235 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HNF4AP41235 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.7■□□□□ 0.74
HNF4AP41235 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HNF4AP41235 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
HNF4AP41235 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HNF4AP41235 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HNF4AP41235 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HNF4AP41235 AC092720.2-201ENST00000602388 1665 ntBASIC19.69■□□□□ 0.74
HNF4AP41235 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HNF4AP41235 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HNF4AP41235 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HNF4AP41235 CNN2P6-201ENST00000439038 900 ntBASIC19.69■□□□□ 0.74
HNF4AP41235 AC007322.4-201ENST00000509611 723 ntBASIC19.69■□□□□ 0.74
HNF4AP41235 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.69■□□□□ 0.74
HNF4AP41235 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
HNF4AP41235 AC073111.5-205ENST00000641717 521 ntBASIC19.69■□□□□ 0.74
HNF4AP41235 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.69■□□□□ 0.74
HNF4AP41235 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HNF4AP41235 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HNF4AP41235 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HNF4AP41235 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
HNF4AP41235 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HNF4AP41235 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HNF4AP41235 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HNF4AP41235 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HNF4AP41235 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.69■□□□□ 0.74
HNF4AP41235 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
HNF4AP41235 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.68■□□□□ 0.74
HNF4AP41235 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HNF4AP41235 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.68■□□□□ 0.74
HNF4AP41235 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HNF4AP41235 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HNF4AP41235 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.68■□□□□ 0.74
HNF4AP41235 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HNF4AP41235 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.68■□□□□ 0.74
HNF4AP41235 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HNF4AP41235 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.68■□□□□ 0.74
HNF4AP41235 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HNF4AP41235 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HNF4AP41235 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.68■□□□□ 0.74
HNF4AP41235 AIRN-201ENST00000601203 4374 ntBASIC19.68■□□□□ 0.74
HNF4AP41235 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HNF4AP41235 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.68■□□□□ 0.74
HNF4AP41235 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HNF4AP41235 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HNF4AP41235 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HNF4AP41235 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HNF4AP41235 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HNF4AP41235 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HNF4AP41235 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HNF4AP41235 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HNF4AP41235 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
HNF4AP41235 AC007322.1-201ENST00000426983 750 ntBASIC19.67■□□□□ 0.74
HNF4AP41235 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms