Protein–RNA interactions for Protein: P33400

RIM101, pH-response transcription factor pacC/RIM101, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM101P33400 AHC1YOR023C 1701 nt5.15□□□□□ -1.58
RIM101P33400 YAR019W-AYAR019W-A 333 nt5.15□□□□□ -1.59
RIM101P33400 YDR239CYDR239C 2364 nt5.14□□□□□ -1.59
RIM101P33400 COX26YDR119W-A 201 nt5.14□□□□□ -1.59
RIM101P33400 SOM1YEL059C-A 225 nt5.14□□□□□ -1.59
RIM101P33400 DOA1YKL213C 2148 nt5.14□□□□□ -1.59
RIM101P33400 RSM19YNR037C 276 nt5.13□□□□□ -1.59
RIM101P33400 SOK1YDR006C 2706 nt5.12□□□□□ -1.59
RIM101P33400 TIM11YDR322C-A 291 nt5.12□□□□□ -1.59
RIM101P33400 STF2YGR008C 255 nt5.12□□□□□ -1.59
RIM101P33400 EXO84YBR102C 2262 nt5.12□□□□□ -1.59
RIM101P33400 PUF4YGL014W 2667 nt5.11□□□□□ -1.59
RIM101P33400 BLM10YFL007W 6432 nt5.11□□□□□ -1.59
RIM101P33400 VPS53YJL029C 2469 nt5.11□□□□□ -1.59
RIM101P33400 YDL196WYDL196W 330 nt5.11□□□□□ -1.59
RIM101P33400 YOR318CYOR318C 306 nt5.11□□□□□ -1.59
RIM101P33400 YCL046WYCL046W 324 nt5.11□□□□□ -1.59
RIM101P33400 YDL034WYDL034W 345 nt5.1□□□□□ -1.59
RIM101P33400 BRE4YDL231C 3378 nt5.1□□□□□ -1.59
RIM101P33400 BNI4YNL233W 2679 nt5.1□□□□□ -1.59
RIM101P33400 YOL097W-AYOL097W-A 186 nt5.1□□□□□ -1.59
RIM101P33400 RTC6YPL183W-A 282 nt5.1□□□□□ -1.59
RIM101P33400 RLI1YDR091C 1827 nt5.09□□□□□ -1.59
RIM101P33400 YMR31YFR049W 372 nt5.09□□□□□ -1.59
RIM101P33400 tL(UAA)QtL(UAA)Q 85 nt5.08□□□□□ -1.6
RIM101P33400 TIM12YBR091C 330 nt5.08□□□□□ -1.6
RIM101P33400 YIL165CYIL165C 360 nt5.07□□□□□ -1.6
RIM101P33400 FIG4YNL325C 2640 nt5.06□□□□□ -1.6
RIM101P33400 YER039C-AYER039C-A 219 nt5.06□□□□□ -1.6
RIM101P33400 tN(GUU)CtN(GUU)C 74 nt5.06□□□□□ -1.6
RIM101P33400 tN(GUU)FtN(GUU)F 74 nt5.06□□□□□ -1.6
RIM101P33400 tN(GUU)GtN(GUU)G 74 nt5.06□□□□□ -1.6
RIM101P33400 tN(GUU)KtN(GUU)K 74 nt5.06□□□□□ -1.6
RIM101P33400 tN(GUU)LtN(GUU)L 74 nt5.06□□□□□ -1.6
RIM101P33400 tN(GUU)N1tN(GUU)N1 74 nt5.06□□□□□ -1.6
RIM101P33400 tN(GUU)N2tN(GUU)N2 74 nt5.06□□□□□ -1.6
RIM101P33400 tN(GUU)O1tN(GUU)O1 74 nt5.06□□□□□ -1.6
RIM101P33400 tN(GUU)O2tN(GUU)O2 74 nt5.06□□□□□ -1.6
RIM101P33400 tN(GUU)PtN(GUU)P 74 nt5.06□□□□□ -1.6
RIM101P33400 YML116W-AYML116W-A 303 nt5.06□□□□□ -1.6
RIM101P33400 CTF4YPR135W 2784 nt5.06□□□□□ -1.6
RIM101P33400 YNL144CYNL144C 2223 nt5.05□□□□□ -1.6
RIM101P33400 SSB1YDL229W 1842 nt5.05□□□□□ -1.6
RIM101P33400 SSB2YNL209W 1842 nt5.05□□□□□ -1.6
RIM101P33400 PHD1YKL043W 1101 nt5.05□□□□□ -1.6
RIM101P33400 PRP22YER013W 3438 nt5.05□□□□□ -1.6
RIM101P33400 RSN1YMR266W 2862 nt5.05□□□□□ -1.6
RIM101P33400 PSK2YOL045W 3306 nt5.05□□□□□ -1.6
RIM101P33400 HOS4YIL112W 3252 nt5.05□□□□□ -1.6
RIM101P33400 YJL070CYJL070C 2667 nt5.04□□□□□ -1.6
RIM101P33400 PSO2YMR137C 1986 nt5.04□□□□□ -1.6
RIM101P33400 YPL044CYPL044C 549 nt5.04□□□□□ -1.6
RIM101P33400 GSC2YGR032W 5688 nt5.04□□□□□ -1.6
RIM101P33400 FLO8YER109C 2400 nt5.04□□□□□ -1.6
RIM101P33400 RPG1YBR079C 2895 nt5.03□□□□□ -1.6
RIM101P33400 YAL044W-AYAL044W-A 333 nt5.03□□□□□ -1.6
RIM101P33400 GIS1YDR096W 2685 nt5.02□□□□□ -1.61
RIM101P33400 VPS34YLR240W 2628 nt5.02□□□□□ -1.61
RIM101P33400 YLL019W-AYLL019W-A 93 nt5.02□□□□□ -1.61
RIM101P33400 YLR146W-AYLR146W-A 189 nt5.02□□□□□ -1.61
RIM101P33400 CDC31YOR257W 486 nt5.02□□□□□ -1.61
RIM101P33400 NTO1YPR031W 2247 nt5.02□□□□□ -1.61
RIM101P33400 CHS3YBR023C 3498 nt5.02□□□□□ -1.61
RIM101P33400 NOP4YPL043W 2058 nt5.01□□□□□ -1.61
RIM101P33400 YDL118WYDL118W 381 nt5.01□□□□□ -1.61
RIM101P33400 SKG6YHR149C 2205 nt5.01□□□□□ -1.61
RIM101P33400 NOC3YLR002C 1992 nt5□□□□□ -1.61
RIM101P33400 FAR1YJL157C 2493 nt5□□□□□ -1.61
RIM101P33400 NUP120YKL057C 3114 nt5□□□□□ -1.61
RIM101P33400 SEC15YGL233W 2733 nt5□□□□□ -1.61
RIM101P33400 YCR087C-AYCR087C-A 462 nt5□□□□□ -1.61
RIM101P33400 YDL242WYDL242W 354 nt5□□□□□ -1.61
RIM101P33400 YGL014C-AYGL014C-A 162 nt5□□□□□ -1.61
RIM101P33400 snR43snR43 209 nt5□□□□□ -1.61
RIM101P33400 CDC15YAR019C 2925 nt5□□□□□ -1.61
RIM101P33400 YOR019WYOR019W 2193 nt4.99□□□□□ -1.61
RIM101P33400 USA1YML029W 2517 nt4.99□□□□□ -1.61
RIM101P33400 MET10YFR030W 3108 nt4.99□□□□□ -1.61
RIM101P33400 GRR1YJR090C 3456 nt4.99□□□□□ -1.61
RIM101P33400 PAN1YIR006C 4443 nt4.99□□□□□ -1.61
RIM101P33400 DIP2YLR129W 2832 nt4.99□□□□□ -1.61
RIM101P33400 MTR10YOR160W 2919 nt4.99□□□□□ -1.61
RIM101P33400 VAC7YNL054W 3498 nt4.99□□□□□ -1.61
RIM101P33400 CCM1YGR150C 2595 nt4.99□□□□□ -1.61
RIM101P33400 ATG13YPR185W 2217 nt4.99□□□□□ -1.61
RIM101P33400 LYP1YNL268W 1836 nt4.98□□□□□ -1.61
RIM101P33400 RIA1YNL163C 3333 nt4.98□□□□□ -1.61
RIM101P33400 YLR149CYLR149C 2193 nt4.98□□□□□ -1.61
RIM101P33400 YDR034C-DYDR034C-D 5313 nt4.97□□□□□ -1.61
RIM101P33400 PEP3YLR148W 2757 nt4.97□□□□□ -1.61
RIM101P33400 JEN1YKL217W 1851 nt4.97□□□□□ -1.61
RIM101P33400 RPL31AYDL075W 342 nt4.97□□□□□ -1.61
RIM101P33400 PBY1YBR094W 2262 nt4.97□□□□□ -1.61
RIM101P33400 TMA108YIL137C 2841 nt4.96□□□□□ -1.62
RIM101P33400 AIM44YPL158C 2277 nt4.96□□□□□ -1.62
RIM101P33400 SPO75YLL005C 2607 nt4.96□□□□□ -1.62
RIM101P33400 MSC6YOR354C 2079 nt4.96□□□□□ -1.62
RIM101P33400 SWI6YLR182W 2412 nt4.95□□□□□ -1.62
RIM101P33400 PXA2YKL188C 2562 nt4.94□□□□□ -1.62
RIM101P33400 APL5YPL195W 2799 nt4.94□□□□□ -1.62
Retrieved 100 of 7,029 protein–RNA pairs in 29 ms