Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.27■□□□□ 0.84
HTR1BP28222 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HTR1BP28222 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.27■□□□□ 0.84
HTR1BP28222 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.27■□□□□ 0.84
HTR1BP28222 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTR1BP28222 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTR1BP28222 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTR1BP28222 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HTR1BP28222 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.27■□□□□ 0.84
HTR1BP28222 KRT18P29-201ENST00000397031 1267 ntBASIC20.27■□□□□ 0.84
HTR1BP28222 AC105020.6-201ENST00000621523 1217 ntBASIC20.27■□□□□ 0.84
HTR1BP28222 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.27■□□□□ 0.84
HTR1BP28222 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.27■□□□□ 0.84
HTR1BP28222 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
HTR1BP28222 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HTR1BP28222 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.27■□□□□ 0.83
HTR1BP28222 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
HTR1BP28222 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HTR1BP28222 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.27■□□□□ 0.83
HTR1BP28222 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1BP28222 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.26■□□□□ 0.83
HTR1BP28222 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1BP28222 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1BP28222 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.26■□□□□ 0.83
HTR1BP28222 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1BP28222 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
HTR1BP28222 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.26■□□□□ 0.83
HTR1BP28222 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1BP28222 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1BP28222 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1BP28222 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.26■□□□□ 0.83
HTR1BP28222 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1BP28222 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
HTR1BP28222 ITM2C-210ENST00000620962 501 ntBASIC20.26■□□□□ 0.83
HTR1BP28222 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.26■□□□□ 0.83
HTR1BP28222 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1BP28222 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.26■□□□□ 0.83
HTR1BP28222 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1BP28222 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1BP28222 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.25■□□□□ 0.83
HTR1BP28222 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HTR1BP28222 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTR1BP28222 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.25■□□□□ 0.83
HTR1BP28222 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTR1BP28222 ESRRAP1-201ENST00000400596 1257 ntBASIC20.25■□□□□ 0.83
HTR1BP28222 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HTR1BP28222 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.25■□□□□ 0.83
HTR1BP28222 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
HTR1BP28222 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HTR1BP28222 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.25■□□□□ 0.83
HTR1BP28222 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HTR1BP28222 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTR1BP28222 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HTR1BP28222 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.25■□□□□ 0.83
HTR1BP28222 HLA-B-256ENST00000639848 1089 ntBASIC20.25■□□□□ 0.83
HTR1BP28222 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HTR1BP28222 AC087633.2-202ENST00000565166 1439 ntBASIC20.25■□□□□ 0.83
HTR1BP28222 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
HTR1BP28222 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTR1BP28222 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.25■□□□□ 0.83
HTR1BP28222 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1BP28222 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1BP28222 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1BP28222 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1BP28222 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.24■□□□□ 0.83
HTR1BP28222 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1BP28222 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1BP28222 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1BP28222 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
HTR1BP28222 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1BP28222 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1BP28222 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
HTR1BP28222 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.24■□□□□ 0.83
HTR1BP28222 AC060766.5-201ENST00000590539 871 ntBASIC20.24■□□□□ 0.83
HTR1BP28222 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1BP28222 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1BP28222 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1BP28222 Z98882.1-201ENST00000622160 2253 ntBASIC20.24■□□□□ 0.83
HTR1BP28222 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HTR1BP28222 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1BP28222 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HTR1BP28222 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.23■□□□□ 0.83
HTR1BP28222 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.23■□□□□ 0.83
HTR1BP28222 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HTR1BP28222 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.23■□□□□ 0.83
HTR1BP28222 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HTR1BP28222 UNC93B5-201ENST00000530315 699 ntBASIC20.23■□□□□ 0.83
HTR1BP28222 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
HTR1BP28222 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTR1BP28222 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HTR1BP28222 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.23■□□□□ 0.83
HTR1BP28222 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTR1BP28222 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HTR1BP28222 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTR1BP28222 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTR1BP28222 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
HTR1BP28222 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HTR1BP28222 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HTR1BP28222 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
HTR1BP28222 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms