Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL1P22362 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL1P22362 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL1P22362 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.55■□□□□ 0.4
CCL1P22362 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL1P22362 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCL1P22362 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL1P22362 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL1P22362 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL1P22362 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL1P22362 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCL1P22362 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL1P22362 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCL1P22362 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCL1P22362 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CCL1P22362 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL1P22362 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL1P22362 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCL1P22362 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCL1P22362 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCL1P22362 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCL1P22362 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.54■□□□□ 0.4
CCL1P22362 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCL1P22362 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCL1P22362 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.54■□□□□ 0.4
CCL1P22362 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCL1P22362 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.54■□□□□ 0.4
CCL1P22362 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
CCL1P22362 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
CCL1P22362 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.54■□□□□ 0.4
CCL1P22362 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.54■□□□□ 0.4
CCL1P22362 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCL1P22362 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCL1P22362 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCL1P22362 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCL1P22362 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCL1P22362 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCL1P22362 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCL1P22362 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCL1P22362 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.53■□□□□ 0.4
CCL1P22362 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCL1P22362 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL1P22362 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCL1P22362 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL1P22362 DPP3P2-201ENST00000416030 1696 ntBASIC17.53■□□□□ 0.4
CCL1P22362 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL1P22362 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL1P22362 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.53■□□□□ 0.4
CCL1P22362 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.53■□□□□ 0.4
CCL1P22362 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.53■□□□□ 0.4
CCL1P22362 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCL1P22362 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCL1P22362 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.53■□□□□ 0.4
CCL1P22362 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCL1P22362 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCL1P22362 PCDHAC2-203ENST00000615316 3011 ntBASIC17.53■□□□□ 0.4
CCL1P22362 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCL1P22362 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL1P22362 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCL1P22362 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.53■□□□□ 0.4
CCL1P22362 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL1P22362 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCL1P22362 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCL1P22362 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCL1P22362 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCL1P22362 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCL1P22362 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCL1P22362 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CCL1P22362 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCL1P22362 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCL1P22362 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.52■□□□□ 0.4
CCL1P22362 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.52■□□□□ 0.4
CCL1P22362 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCL1P22362 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCL1P22362 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CCL1P22362 PGM5P4-201ENST00000421970 445 ntBASIC17.52■□□□□ 0.4
CCL1P22362 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCL1P22362 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCL1P22362 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.52■□□□□ 0.4
CCL1P22362 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.52■□□□□ 0.4
CCL1P22362 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCL1P22362 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.52■□□□□ 0.4
CCL1P22362 AC087633.2-202ENST00000565166 1439 ntBASIC17.52■□□□□ 0.4
CCL1P22362 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCL1P22362 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCL1P22362 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCL1P22362 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCL1P22362 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCL1P22362 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.52■□□□□ 0.39
CCL1P22362 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.51■□□□□ 0.39
CCL1P22362 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.51■□□□□ 0.39
CCL1P22362 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.51■□□□□ 0.39
CCL1P22362 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.51■□□□□ 0.39
CCL1P22362 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCL1P22362 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCL1P22362 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.51■□□□□ 0.39
CCL1P22362 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CCL1P22362 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCL1P22362 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCL1P22362 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms