Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF1BP20333 RNF165-205ENST00000588679 2904 ntBASIC18.9■□□□□ 0.62
TNFRSF1BP20333 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
TNFRSF1BP20333 AC010141.2-201ENST00000452426 721 ntBASIC18.9■□□□□ 0.62
TNFRSF1BP20333 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF1BP20333 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF1BP20333 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF1BP20333 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TNFRSF1BP20333 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF1BP20333 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF1BP20333 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TNFRSF1BP20333 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFRSF1BP20333 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.89■□□□□ 0.61
TNFRSF1BP20333 IRS3P-201ENST00000223076 1006 ntBASIC18.89■□□□□ 0.61
TNFRSF1BP20333 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TNFRSF1BP20333 AC104187.1-201ENST00000607510 612 ntBASIC18.89■□□□□ 0.61
TNFRSF1BP20333 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TNFRSF1BP20333 MIR2861-201ENST00000636310 90 ntBASIC18.89■□□□□ 0.61
TNFRSF1BP20333 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
TNFRSF1BP20333 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TNFRSF1BP20333 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFRSF1BP20333 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TNFRSF1BP20333 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.89■□□□□ 0.61
TNFRSF1BP20333 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1BP20333 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.88■□□□□ 0.61
TNFRSF1BP20333 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1BP20333 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1BP20333 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1BP20333 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1BP20333 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1BP20333 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1BP20333 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1BP20333 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TNFRSF1BP20333 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1BP20333 AC105265.2-201ENST00000467189 838 ntBASIC18.88■□□□□ 0.61
TNFRSF1BP20333 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.88■□□□□ 0.61
TNFRSF1BP20333 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1BP20333 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1BP20333 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TNFRSF1BP20333 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1BP20333 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TNFRSF1BP20333 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1BP20333 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1BP20333 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.88■□□□□ 0.61
TNFRSF1BP20333 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFRSF1BP20333 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TNFRSF1BP20333 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFRSF1BP20333 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFRSF1BP20333 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TNFRSF1BP20333 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.87■□□□□ 0.61
TNFRSF1BP20333 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TNFRSF1BP20333 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.87■□□□□ 0.61
TNFRSF1BP20333 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.87■□□□□ 0.61
TNFRSF1BP20333 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TNFRSF1BP20333 AC087289.5-201ENST00000586076 3175 ntBASIC18.87■□□□□ 0.61
TNFRSF1BP20333 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TNFRSF1BP20333 AC116050.2-201ENST00000612102 1779 ntBASIC18.87■□□□□ 0.61
TNFRSF1BP20333 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TNFRSF1BP20333 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TNFRSF1BP20333 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF1BP20333 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF1BP20333 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF1BP20333 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.86■□□□□ 0.61
TNFRSF1BP20333 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF1BP20333 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF1BP20333 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.86■□□□□ 0.61
TNFRSF1BP20333 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF1BP20333 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TNFRSF1BP20333 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF1BP20333 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF1BP20333 AC120498.10-201ENST00000621827 505 ntBASIC18.86■□□□□ 0.61
TNFRSF1BP20333 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF1BP20333 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF1BP20333 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.86■□□□□ 0.61
TNFRSF1BP20333 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF1BP20333 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1BP20333 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TNFRSF1BP20333 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1BP20333 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1BP20333 AC125437.2-201ENST00000625180 2167 ntBASIC18.85■□□□□ 0.61
TNFRSF1BP20333 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.85■□□□□ 0.61
TNFRSF1BP20333 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.85■□□□□ 0.61
TNFRSF1BP20333 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1BP20333 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1BP20333 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TNFRSF1BP20333 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1BP20333 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TNFRSF1BP20333 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1BP20333 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1BP20333 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1BP20333 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.85■□□□□ 0.61
TNFRSF1BP20333 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.85■□□□□ 0.61
TNFRSF1BP20333 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TNFRSF1BP20333 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1BP20333 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.85■□□□□ 0.61
TNFRSF1BP20333 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1BP20333 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms