Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.98■□□□□ 0.95
ERCC2P18074 AL356652.1-201ENST00000615962 565 ntBASIC20.98■□□□□ 0.95
ERCC2P18074 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC2P18074 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC2P18074 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC2P18074 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC2P18074 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC2P18074 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC2P18074 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC2P18074 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC2P18074 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC2P18074 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC2P18074 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC2P18074 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.97■□□□□ 0.95
ERCC2P18074 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC2P18074 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC2P18074 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.97■□□□□ 0.95
ERCC2P18074 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC2P18074 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC2P18074 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC2P18074 AC092720.2-201ENST00000602388 1665 ntBASIC20.97■□□□□ 0.95
ERCC2P18074 AL355472.2-201ENST00000422958 438 ntBASIC20.97■□□□□ 0.95
ERCC2P18074 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC2P18074 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.97■□□□□ 0.95
ERCC2P18074 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
ERCC2P18074 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC2P18074 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC2P18074 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ERCC2P18074 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.97■□□□□ 0.95
ERCC2P18074 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC2P18074 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.97■□□□□ 0.95
ERCC2P18074 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC2P18074 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC2P18074 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.96■□□□□ 0.95
ERCC2P18074 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC2P18074 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC2P18074 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC2P18074 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC2P18074 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.96■□□□□ 0.95
ERCC2P18074 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC2P18074 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC2P18074 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ERCC2P18074 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC2P18074 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC2P18074 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC2P18074 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.96■□□□□ 0.95
ERCC2P18074 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ERCC2P18074 CYP2T3P-201ENST00000601990 817 ntBASIC20.96■□□□□ 0.95
ERCC2P18074 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC2P18074 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC2P18074 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.96■□□□□ 0.95
ERCC2P18074 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ERCC2P18074 LINC01521-201ENST00000504184 1943 ntBASIC20.96■□□□□ 0.95
ERCC2P18074 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC2P18074 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC2P18074 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
ERCC2P18074 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
ERCC2P18074 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC2P18074 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC2P18074 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC2P18074 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC2P18074 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.95■□□□□ 0.94
ERCC2P18074 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC2P18074 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ERCC2P18074 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC2P18074 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC2P18074 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC2P18074 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC2P18074 AC006970.2-201ENST00000450065 779 ntBASIC20.95■□□□□ 0.94
ERCC2P18074 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.95■□□□□ 0.94
ERCC2P18074 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.95■□□□□ 0.94
ERCC2P18074 AF201337.1-201ENST00000520239 748 ntBASIC20.95■□□□□ 0.94
ERCC2P18074 AC105036.2-201ENST00000569468 176 ntBASIC20.95■□□□□ 0.94
ERCC2P18074 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC2P18074 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC2P18074 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ERCC2P18074 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC2P18074 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.95■□□□□ 0.94
ERCC2P18074 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC2P18074 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.95■□□□□ 0.94
ERCC2P18074 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC2P18074 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC2P18074 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC2P18074 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC2P18074 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC2P18074 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC2P18074 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.94■□□□□ 0.94
ERCC2P18074 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC2P18074 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ERCC2P18074 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ERCC2P18074 KRT18P68-201ENST00000392293 1000 ntBASIC20.94■□□□□ 0.94
ERCC2P18074 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.94■□□□□ 0.94
ERCC2P18074 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.94■□□□□ 0.94
ERCC2P18074 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC2P18074 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC2P18074 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.94■□□□□ 0.94
ERCC2P18074 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC2P18074 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC2P18074 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.93■□□□□ 0.94
ERCC2P18074 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms